ATTED-II : GeneCoexpression result

Species	Gene	Description
cre-r.1	CHLRE_11g481700v5	uncharacterized protein
ath-u.5	AT5G55100	SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
gma-u.5	100801276	splicing factor, suppressor of white-apricot homolog
gma-u.5	100791165	splicing factor, suppressor of white-apricot homolog
sly-u.5	101250744	uncharacterized LOC101250744
osa-u.5	4325296	uncharacterized LOC4325296
zma-u.5	100383427	SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
bra-r.6	103851906	splicing factor, suppressor of white-apricot homolog
vvi-u.5	100250252	uncharacterized LOC100250252
ppo-u.5	7478709	uncharacterized LOC7478709
mtr-u.5	11425876	protein suppressor of white apricot
tae-r.2	123061788	NKAP family protein UM04995
tae-r.2	123078888	splicing factor, suppressor of white-apricot homolog
tae-r.2	123070467	uncharacterized LOC123070467
hvu-r.1	123444207	splicing factor, suppressor of white-apricot homolog
ghi-r.1	107903459	splicing factor, suppressor of white-apricot homolog
ghi-r.1	107932757	protein suppressor of white apricot
bna-r.1	106390010	splicing factor, suppressor of white-apricot homolog
bna-r.1	125581532	splicing factor, suppressor of white-apricot homolog
sbi-r.1	8068064	splicing factor, suppressor of white-apricot homolog
sot-r.1	102593692	splicing factor, suppressor of white-apricot homolog
cit-r.1	102619096	uncharacterized LOC102619096
bdi-r.1	100831732	uncharacterized LOC100831732
nta-r.1	107786983	uncharacterized LOC107786983
nta-r.1	142182631	uncharacterized LOC142182631

Annotation

functional annotation

KEGG

GO BP

GO:0000395 [list] [network] mRNA 5'-splice site recognition	(3 genes)	IEA
GO:0006396 [list] [network] RNA processing	(507 genes)	IEA

GO CC

GO MF

GO:0003723 [list] [network] RNA binding

(670 genes)

IEA

Protein

XP_042919758.1 [sequence] [blastp]
XP_042919759.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, chlo 4	(predict for XP_042919758.1)
nucl 8, chlo 1	(predict for XP_042919759.1)

Subcellular
localization
TargetP

mito 4	(predict for XP_042919758.1)
other 6	(predict for XP_042919759.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_11g481700v5	ath-u.5 for AT5G55100	gma-u.5 for 100801276	gma-u.5 for 100791165	sly-u.5 for 101250744	osa-u.5 for 4325296	zma-u.5 for 100383427	bra-r.6 for 103851906	vvi-u.5 for 100250252	ppo-u.5 for 7478709	mtr-u.5 for 11425876	tae-r.2 for 123061788	tae-r.2 for 123078888	tae-r.2 for 123070467	hvu-r.1 for 123444207	ghi-r.1 for 107903459	ghi-r.1 for 107932757	bna-r.1 for 106390010	bna-r.1 for 125581532	sbi-r.1 for 8068064	sot-r.1 for 102593692	cit-r.1 for 102619096	bdi-r.1 for 100831732	nta-r.1 for 107786983	nta-r.1 for 142182631

Ortholog

Ortholog ID: 10398

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

Function^*

uncharacterized protein

SWAP (Suppressor-of-White-APricot)/surp domain-containing protein