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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g159200v5   uncharacterized protein 
 ath-u.5   UPL7   ubiquitin-protein ligase 7 
 gma-u.5   100805744   E3 ubiquitin-protein ligase UPL7 
 gma-u.5   100527169   E3 ubiquitin-protein ligase UPL7 
 sly-u.5   101250834   E3 ubiquitin-protein ligase UPL7 
 osa-u.5   4333737   E3 ubiquitin-protein ligase UPL7 
 zma-u.5   103625986   E3 ubiquitin-protein ligase UPL7 
 bra-r.6   103863441   E3 ubiquitin-protein ligase UPL7 
 vvi-u.5   100247661   E3 ubiquitin-protein ligase UPL7 
 ppo-u.5   7468791   E3 ubiquitin-protein ligase UPL7 
 mtr-u.5   25499357   E3 ubiquitin-protein ligase UPL7 
 tae-r.2   123095700   E3 ubiquitin-protein ligase UPL7 
 tae-r.2   123090681   E3 ubiquitin-protein ligase UPL7 
 tae-r.2   123087258   E3 ubiquitin-protein ligase UPL7 
 hvu-r.1   123447147   E3 ubiquitin-protein ligase UPL7 
 ghi-r.1   121202840   E3 ubiquitin-protein ligase UPL7 
 ghi-r.1   107905334   E3 ubiquitin-protein ligase UPL7 
 bna-r.1   106389133   E3 ubiquitin-protein ligase UPL7 
 bna-r.1   106401335   E3 ubiquitin-protein ligase UPL7 
 sbi-r.1   8067269   E3 ubiquitin-protein ligase UPL7 
 sot-r.1   102582735   E3 ubiquitin-protein ligase UPL7 
 cit-r.1   102621690   E3 ubiquitin-protein ligase UPL7 
 bdi-r.1   100826283   E3 ubiquitin-protein ligase UPL7 
 nta-r.1   107829835   E3 ubiquitin-protein ligase UPL7 
 nta-r.1   107791354   E3 ubiquitin-protein ligase UPL7 

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Top 50 coexpressed genes to CHLRE_03g159200v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g159200v5 (cre-r.1 coexpression data)

CoexMap"5723012"


creCHLRE_03g159200v5 | Entrez gene ID : 5723012      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 1 1 1 1 1 3 1 2 2 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000209 [list] [network] protein polyubiquitination  (40 genes)  IEA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (159 genes)  IEA  
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (65 genes)  IEA  
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_042925793.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  vacu 1,  nucl 1,  cysk_nucl 1,  E.R._vacu 1,  mito 1,  plas 1,  E.R. 1,  E.R._plas 1,  mito_plas 1  (predict for XP_042925793.1)
Subcellular
localization
TargetP
other 6,  mito 4  (predict for XP_042925793.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g159200v5
ath-u.5
for
UPL7
gma-u.5
for
100805744
gma-u.5
for
100527169
sly-u.5
for
101250834
osa-u.5
for
4333737
zma-u.5
for
103625986
bra-r.6
for
103863441
vvi-u.5
for
100247661
ppo-u.5
for
7468791
mtr-u.5
for
25499357
tae-r.2
for
123095700
tae-r.2
for
123090681
tae-r.2
for
123087258
hvu-r.1
for
123447147
ghi-r.1
for
121202840
ghi-r.1
for
107905334
bna-r.1
for
106389133
bna-r.1
for
106401335
sbi-r.1
for
8067269
sot-r.1
for
102582735
cit-r.1
for
102621690
bdi-r.1
for
100826283
nta-r.1
for
107829835
nta-r.1
for
107791354


Ortholog ID: 10147
Species cre ath gma gma sly osa zma bra vvi ppo mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_03g159200v5 UPL7 LOC100805744 LOC100527169 LOC101250834 LOC4333737 LOC103625986 LOC103863441 LOC100247661 LOC7468791 LOC25499357 LOC123095700 LOC123090681 LOC123087258 LOC123447147 LOC121202840 LOC107905334 LOC106389133 LOC106401335 LOC8067269 LOC102582735 LOC102621690 LOC100826283 LOC107829835 LOC107791354
Function* uncharacterized protein ubiquitin-protein ligase 7 E3 ubiquitin-protein ligase UPL7 E3 ubiquitin-protein ligase UPL7 E3 ubiquitin-protein ligase UPL7 E3 ubiquitin-protein ligase UPL7 E3 ubiquitin-protein ligase UPL7 E3 ubiquitin-protein ligase UPL7 E3 ubiquitin-protein ligase UPL7 E3 ubiquitin-protein ligase UPL7 E3 ubiquitin-protein ligase UPL7 E3 ubiquitin-protein ligase UPL7 E3 ubiquitin-protein ligase UPL7 E3 ubiquitin-protein ligase UPL7 E3 ubiquitin-protein ligase UPL7 E3 ubiquitin-protein ligase UPL7 E3 ubiquitin-protein ligase UPL7 E3 ubiquitin-protein ligase UPL7 E3 ubiquitin-protein ligase UPL7 E3 ubiquitin-protein ligase UPL7 E3 ubiquitin-protein ligase UPL7 E3 ubiquitin-protein ligase UPL7 E3 ubiquitin-protein ligase UPL7 E3 ubiquitin-protein ligase UPL7 E3 ubiquitin-protein ligase UPL7
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 3
sly04120 Ubiquitin mediated proteolysis 2
sly00562 Inositol phosphate metabolism 2
sly04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 7
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03083 Polycomb repressive complex 4
bra03250 Viral life cycle - HIV-1 4
bra04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
ppo03013 Nucleocytoplasmic transport 3
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
mtr00562 Inositol phosphate metabolism 2
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi04136 Autophagy - other 3
ghi04518 Integrin signaling 3
ghi04146 Peroxisome 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi04136 Autophagy - other 3
ghi04518 Integrin signaling 3
ghi04146 Peroxisome 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 4
nta04120 Ubiquitin mediated proteolysis 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta03015 mRNA surveillance pathway 2
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5723012 824475 100805744 100527169 101250834 4333737 103625986 103863441 100247661 7468791 25499357 123095700 123090681 123087258 123447147 121202840 107905334 106389133 106401335 8067269 102582735 102621690 100826283 107829835 107791354
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