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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g155800v5   uncharacterized protein 
 ath-u.5   AT2G40780   Nucleic acid-binding, OB-fold-like protein 
 gma-u.5   100306612   uncharacterized LOC100306612 
 sly-u.5   101267408   uncharacterized LOC101267408 
 osa-u.5   4331384   uncharacterized LOC4331384 
 zma-u.5   100282726   RNA binding protein 
 bra-r.6   103865836   probable RNA-binding protein EIF1AD 
 vvi-u.5   100248727   uncharacterized LOC100248727 
 ppo-u.5   18108343   uncharacterized LOC18108343 
 mtr-u.5   25489815   probable RNA-binding protein EIF1AD 
 tae-r.2   123099268   probable RNA-binding protein EIF1AD 
 hvu-r.1   123403505   probable RNA-binding protein EIF1AD 
 ghi-r.1   107896569   probable RNA-binding protein EIF1AD 
 ghi-r.1   107916260   probable RNA-binding protein EIF1AD 
 bna-r.1   106347816   probable RNA-binding protein EIF1AD 
 bna-r.1   106391619   probable RNA-binding protein EIF1AD 
 bna-r.1   106416889   uncharacterized LOC106416889 
 sbi-r.1   8059488   probable RNA-binding protein EIF1AD 
 sot-r.1   102585241   probable RNA-binding protein EIF1AD 
 sot-r.1   102583002   probable RNA-binding protein EIF1AD 
 cit-r.1   102630681   uncharacterized LOC102630681 
 bdi-r.1   100828332   probable RNA-binding protein EIF1AD 
 nta-r.1   107776914   uncharacterized LOC107776914 
 nta-r.1   107802982   uncharacterized LOC107802982 

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Top 50 coexpressed genes to CHLRE_03g155800v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g155800v5 (cre-r.1 coexpression data)

CoexMap"5723058"


creCHLRE_03g155800v5 | Entrez gene ID : 5723058      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 1 1 1 1 1 1 1 1 1 1 2 3 1 2 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006413 [list] [network] translational initiation  (30 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0003743 [list] [network] translation initiation factor activity  (37 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (670 genes)  IEA  
Protein XP_042925718.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 8,  nucl 1  (predict for XP_042925718.1)
Subcellular
localization
TargetP
other 4,  mito 4  (predict for XP_042925718.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g155800v5
ath-u.5
for
AT2G40780
gma-u.5
for
100306612
sly-u.5
for
101267408
osa-u.5
for
4331384
zma-u.5
for
100282726
bra-r.6
for
103865836
vvi-u.5
for
100248727
ppo-u.5
for
18108343
mtr-u.5
for
25489815
tae-r.2
for
123099268
hvu-r.1
for
123403505
ghi-r.1
for
107896569
ghi-r.1
for
107916260
bna-r.1
for
106347816
bna-r.1
for
106391619
bna-r.1
for
106416889
sbi-r.1
for
8059488
sot-r.1
for
102585241
sot-r.1
for
102583002
cit-r.1
for
102630681
bdi-r.1
for
100828332
nta-r.1
for
107776914
nta-r.1
for
107802982


Ortholog ID: 5971
Species cre ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot sot cit bdi nta nta
Symbol CHLRE_03g155800v5 AT2G40780 LOC100306612 LOC101267408 LOC4331384 LOC100282726 LOC103865836 LOC100248727 LOC18108343 LOC25489815 LOC123099268 LOC123043712 LOC123403505 LOC107896569 LOC107916260 LOC106347816 LOC106391619 LOC8059488 LOC102585241 LOC102583002 LOC102630681 LOC100828332 LOC107776914 LOC107802982
Function* uncharacterized protein Nucleic acid-binding, OB-fold-like protein uncharacterized LOC100306612 uncharacterized LOC101267408 uncharacterized LOC4331384 RNA binding protein probable RNA-binding protein EIF1AD uncharacterized LOC100248727 uncharacterized LOC18108343 probable RNA-binding protein EIF1AD probable RNA-binding protein EIF1AD probable RNA-binding protein EIF1AD probable RNA-binding protein EIF1AD probable RNA-binding protein EIF1AD probable RNA-binding protein EIF1AD probable RNA-binding protein EIF1AD probable RNA-binding protein EIF1AD probable RNA-binding protein EIF1AD probable RNA-binding protein EIF1AD probable RNA-binding protein EIF1AD uncharacterized LOC102630681 probable RNA-binding protein EIF1AD uncharacterized LOC107776914 uncharacterized LOC107802982
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
cre00240 Pyrimidine metabolism 2
cre01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma04120 Ubiquitin mediated proteolysis 3
gma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00510 N-Glycan biosynthesis 3
osa00513 Various types of N-glycan biosynthesis 3
osa04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
zma03018 RNA degradation 3
zma03040 Spliceosome 3
zma04141 Protein processing in endoplasmic reticulum 2
zma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 8
bra03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 2
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
ghi03020 RNA polymerase 2
ghi03420 Nucleotide excision repair 2
ghi00061 Fatty acid biosynthesis 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
ghi03020 RNA polymerase 2
ghi03420 Nucleotide excision repair 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna03018 RNA degradation 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
bna03040 Spliceosome 2
bna03050 Proteasome 2
bna03020 RNA polymerase 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 8
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 4
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta03250 Viral life cycle - HIV-1 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5723058 818675 100306612 101267408 4331384 100282726 103865836 100248727 18108343 25489815 123099268 123043712 123403505 107896569 107916260 106347816 106391619 8059488 102585241 102583002 102630681 100828332 107776914 107802982
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