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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g155001v5   uncharacterized protein 
 ath-u.5   ISA1   isoamylase 1 
 gma-u.5   100792587   isoamylase 1, chloroplastic 
 sly-u.5   101249741   isoamylase 1, chloroplastic 
 osa-u.5   4346068   isoamylase 1, chloroplastic-like 
 zma-u.5   542318   sugary 1 
 bra-r.6   103866998   isoamylase 1, chloroplastic 
 vvi-u.5   100261768   isoamylase 1, chloroplastic 
 ppo-u.5   7490462   isoamylase 1, chloroplastic 
 ppo-u.5   7485483   isoamylase 1, chloroplastic 
 mtr-u.5   11428998   isoamylase 1, chloroplastic 
 tae-r.2   123151415   isoamylase 1, chloroplastic 
 tae-r.2   542884   isoamylase 
 tae-r.2   123164512   isoamylase 1, chloroplastic 
 hvu-r.1   123407337   isoamylase 1, chloroplastic 
 ghi-r.1   107931589   isoamylase 1, chloroplastic 
 ghi-r.1   107904305   isoamylase 1, chloroplastic 
 bna-r.1   106396428   isoamylase 1, chloroplastic 
 bna-r.1   106450816   isoamylase 1, chloroplastic 
 sbi-r.1   8081346   isoamylase 1, chloroplastic 
 sot-r.1   102577466   isoamylase 
 cit-r.1   102616774   isoamylase 1, chloroplastic 
 bdi-r.1   100845703   isoamylase 1, chloroplastic 
 nta-r.1   107760677   isoamylase 1, chloroplastic-like 
 nta-r.1   107778772   isoamylase 1, chloroplastic 

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Top 50 coexpressed genes to CHLRE_03g155001v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g155001v5 (cre-r.1 coexpression data)

CoexMap"5723075"


creCHLRE_03g155001v5 | Entrez gene ID : 5723075    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 1 1 1 1 1 1 2 1 3 1 2 2 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre00500 [list] [network] Starch and sucrose metabolism (47 genes)
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (185 genes)  IEA  
GO CC
GO MF
GO:0004553 [list] [network] hydrolase activity, hydrolyzing O-glycosyl compounds  (63 genes)  IEA  
Protein XP_042925708.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 2  (predict for XP_042925708.1)
Subcellular
localization
TargetP
chlo 5,  mito 4  (predict for XP_042925708.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g155001v5
ath-u.5
for
ISA1
gma-u.5
for
100792587
sly-u.5
for
101249741
osa-u.5
for
4346068
zma-u.5
for
542318
bra-r.6
for
103866998
vvi-u.5
for
100261768
ppo-u.5
for
7490462
ppo-u.5
for
7485483
mtr-u.5
for
11428998
tae-r.2
for
123151415
tae-r.2
for
542884
tae-r.2
for
123164512
hvu-r.1
for
123407337
ghi-r.1
for
107931589
ghi-r.1
for
107904305
bna-r.1
for
106396428
bna-r.1
for
106450816
sbi-r.1
for
8081346
sot-r.1
for
102577466
cit-r.1
for
102616774
bdi-r.1
for
100845703
nta-r.1
for
107760677
nta-r.1
for
107778772


Ortholog ID: 9427
Species cre ath gma sly osa zma bra vvi ppo ppo mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_03g155001v5 ISA1 LOC100792587 LOC101249741 LOC4346068 LOC542318 LOC103866998 LOC100261768 LOC7490462 LOC7485483 LOC11428998 LOC123151415 LOC542884 LOC123164512 LOC123407337 LOC107931589 LOC107904305 LOC106396428 LOC106450816 LOC8081346 LOC102577466 LOC102616774 LOC100845703 LOC107760677 LOC107778772
Function* uncharacterized protein isoamylase 1 isoamylase 1, chloroplastic isoamylase 1, chloroplastic isoamylase 1, chloroplastic-like sugary 1 isoamylase 1, chloroplastic isoamylase 1, chloroplastic isoamylase 1, chloroplastic isoamylase 1, chloroplastic isoamylase 1, chloroplastic isoamylase 1, chloroplastic isoamylase isoamylase 1, chloroplastic isoamylase 1, chloroplastic isoamylase 1, chloroplastic isoamylase 1, chloroplastic isoamylase 1, chloroplastic isoamylase 1, chloroplastic isoamylase 1, chloroplastic isoamylase isoamylase 1, chloroplastic isoamylase 1, chloroplastic isoamylase 1, chloroplastic-like isoamylase 1, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 11
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 5
gma00500 Starch and sucrose metabolism 4
gma00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 5
sly00520 Amino sugar and nucleotide sugar metabolism 2
sly01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 2
osa00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 10
zma00260 Glycine, serine and threonine metabolism 2
zma00261 Monobactam biosynthesis 2
zma00270 Cysteine and methionine metabolism 2
zma00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 5
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 6
mtr00520 Amino sugar and nucleotide sugar metabolism 3
mtr01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 15
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 15
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 15
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 15
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 15
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 14
sbi00520 Amino sugar and nucleotide sugar metabolism 2
sbi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 10
sot00520 Amino sugar and nucleotide sugar metabolism 2
sot01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 7
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 7
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta00511 Other glycan degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5723075 818580 100792587 101249741 4346068 542318 103866998 100261768 7490462 7485483 11428998 123151415 542884 123164512 123407337 107931589 107904305 106396428 106450816 8081346 102577466 102616774 100845703 107760677 107778772
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