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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g154425v5   uncharacterized protein 
 cre-r.1   CHLRE_06g278219v5   uncharacterized protein 
 ath-u.5   CLASP   CLIP-associated protein 
 gma-u.5   100801377   CLIP-associated protein 
 gma-u.5   100796697   CLIP-associated protein 
 gma-u.5   100775793   CLIP-associated protein 
 sly-u.5   101260646   CLIP-associated protein-like 
 sly-u.5   101265274   CLIP-associated protein-like 
 osa-u.5   4336347   CLIP-associated protein 
 osa-u.5   4331138   CLIP-associated protein 
 osa-u.5   4329991   CLIP-associated protein 
 zma-u.5   103627891   CLIP-associated protein 
 zma-u.5   103642826   CLIP-associated protein 
 zma-u.5   103646242   CLIP-associated protein 
 bra-r.6   103828199   CLIP-associated protein 
 bra-r.6   108870350   CLIP-associated protein 
 bra-r.6   103837994   CLIP-associated protein 
 vvi-u.5   100254930   CLIP-associated protein 
 ppo-u.5   7471196   CLIP-associated protein 
 mtr-u.5   11440470   CLIP-associated protein 
 mtr-u.5   25484157   CLIP-associated protein 
 tae-r.2   123189729   CLIP-associated protein 
 hvu-r.1   123427199   CLIP-associated protein-like 
 hvu-r.1   123404672   CLIP-associated protein-like 
 hvu-r.1   123403800   CLIP-associated protein-like 
 ghi-r.1   107944919   CLIP-associated protein 
 ghi-r.1   107942546   CLIP-associated protein 
 ghi-r.1   107925864   CLIP-associated protein 
 bna-r.1   106368831   CLIP-associated protein-like 
 bna-r.1   111212370   CLIP-associated protein 
 bna-r.1   106414904   CLIP-associated protein 
 sbi-r.1   8061883   CLIP-associated protein 
 sbi-r.1   8084710   CLIP-associated protein 
 sot-r.1   102584952   CLIP-associated protein-like 
 sot-r.1   102583830   CLIP-associated protein-like 
 cit-r.1   102621123   CLIP-associated protein 
 bdi-r.1   100829320   CLIP-associated protein 
 bdi-r.1   100831199   CLIP-associated protein 
 bdi-r.1   100843375   CLIP-associated protein 
 nta-r.1   107821432   CLIP-associated protein-like 
 nta-r.1   107784908   CLIP-associated protein 
 nta-r.1   107831163   CLIP-associated protein 

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Top 50 coexpressed genes to CHLRE_03g154425v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g154425v5 (cre-r.1 coexpression data)

CoexMap"5723084"


creCHLRE_03g154425v5 | Entrez gene ID : 5723084      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 2 1 3 2 3 3 3 1 1 2 1 3 3 3 2 2 1 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000226 [list] [network] microtubule cytoskeleton organization  (174 genes)  IEA  
GO CC
GO:0005881 [list] [network] cytoplasmic microtubule  (12 genes)  IEA  
GO MF
GO:0008017 [list] [network] microtubule binding  (114 genes)  IEA  
Protein XP_001697468.1 [sequence] [blastp]
XP_042925699.1 [sequence] [blastp]
XP_042925700.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 7,  nucl 1,  vacu 1,  E.R. 1,  cysk 1,  cysk_nucl 1,  E.R._vacu 1  (predict for XP_001697468.1)
chlo 8,  mito 1  (predict for XP_042925699.1)
E.R. 4,  E.R._plas 3,  nucl 1,  vacu 1,  plas 1,  cysk_nucl 1  (predict for XP_042925700.1)
Subcellular
localization
TargetP
other 7  (predict for XP_001697468.1)
mito 6,  chlo 3  (predict for XP_042925699.1)
other 7  (predict for XP_042925700.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g154425v5
cre-r.1
for
CHLRE_06g278219v5
ath-u.5
for
CLASP
gma-u.5
for
100801377
gma-u.5
for
100796697
gma-u.5
for
100775793
sly-u.5
for
101260646
sly-u.5
for
101265274
osa-u.5
for
4336347
osa-u.5
for
4331138
osa-u.5
for
4329991
zma-u.5
for
103627891
zma-u.5
for
103642826
zma-u.5
for
103646242
bra-r.6
for
103828199
bra-r.6
for
108870350
bra-r.6
for
103837994
vvi-u.5
for
100254930
ppo-u.5
for
7471196
mtr-u.5
for
11440470
mtr-u.5
for
25484157
tae-r.2
for
123189729
hvu-r.1
for
123427199
hvu-r.1
for
123404672
hvu-r.1
for
123403800
ghi-r.1
for
107944919
ghi-r.1
for
107942546
ghi-r.1
for
107925864
bna-r.1
for
106368831
bna-r.1
for
111212370
bna-r.1
for
106414904
sbi-r.1
for
8061883
sbi-r.1
for
8084710
sot-r.1
for
102584952
sot-r.1
for
102583830
cit-r.1
for
102621123
bdi-r.1
for
100829320
bdi-r.1
for
100831199
bdi-r.1
for
100843375
nta-r.1
for
107821432
nta-r.1
for
107784908
nta-r.1
for
107831163


Ortholog ID: 2613
Species cre cre ath gma gma gma sly sly osa osa osa zma zma zma bra bra bra vvi ppo mtr mtr tae tae hvu hvu hvu ghi ghi ghi bna bna bna sbi sbi sot sot cit bdi bdi bdi nta nta nta
Symbol CHLRE_03g154425v5 CHLRE_06g278219v5 CLASP LOC100801377 LOC100796697 LOC100820523 LOC101260646 LOC101265274 LOC4336347 LOC4331138 LOC4329991 LOC103627891 LOC103642826 LOC103646242 LOC103828199 LOC108870350 LOC103837994 LOC100254930 LOC7471196 LOC11440470 LOC25484157 LOC123045982 LOC123053856 LOC123427199 LOC123404672 LOC123403800 LOC107942546 LOC107925864 LOC107890436 LOC106368831 LOC106414904 LOC106445387 LOC8061883 LOC8084710 LOC102584952 LOC102583830 LOC102621123 LOC100829320 LOC100831199 LOC100843375 LOC107821432 LOC107831163 LOC107788562
Function* uncharacterized protein uncharacterized protein CLIP-associated protein CLIP-associated protein CLIP-associated protein CLIP-associated protein CLIP-associated protein-like CLIP-associated protein-like CLIP-associated protein CLIP-associated protein CLIP-associated protein CLIP-associated protein CLIP-associated protein CLIP-associated protein CLIP-associated protein CLIP-associated protein CLIP-associated protein CLIP-associated protein CLIP-associated protein CLIP-associated protein CLIP-associated protein CLIP-associated protein CLIP-associated protein CLIP-associated protein-like CLIP-associated protein-like CLIP-associated protein-like CLIP-associated protein CLIP-associated protein CLIP-associated protein-like CLIP-associated protein-like CLIP-associated protein CLIP-associated protein CLIP-associated protein CLIP-associated protein CLIP-associated protein-like CLIP-associated protein-like CLIP-associated protein CLIP-associated protein CLIP-associated protein CLIP-associated protein CLIP-associated protein-like CLIP-associated protein CLIP-associated protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 5
gma04136 Autophagy - other 2
gma04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 4
gma03082 ATP-dependent chromatin remodeling 2
gma03040 Spliceosome 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00073 Cutin, suberine and wax biosynthesis 2
osa04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00061 Fatty acid biosynthesis 2
zma01040 Biosynthesis of unsaturated fatty acids 2
zma01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 4
zma04142 Lysosome 3
zma05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 3
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 5
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 4
mtr04144 Endocytosis 3
mtr05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 3
tae00030 Pentose phosphate pathway 3
tae00051 Fructose and mannose metabolism 3
tae00052 Galactose metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
hvu00240 Pyrimidine metabolism 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 4
ghi01250 Biosynthesis of nucleotide sugars 4
ghi00230 Purine metabolism 2
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 3
ghi01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 3
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04145 Phagosome 2
sot04517 IgSF CAM signaling 2
sot04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 3
sot04145 Phagosome 2
sot04517 IgSF CAM signaling 2
sot04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 8
nta05100 Bacterial invasion of epithelial cells 6
nta04142 Lysosome 4
nta04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 8
nta05100 Bacterial invasion of epithelial cells 6
nta04142 Lysosome 4
nta04141 Protein processing in endoplasmic reticulum 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5723084 5723625 816539 100801377 100796697 100820523 101260646 101265274 4336347 4331138 4329991 103627891 103642826 103646242 103828199 108870350 103837994 100254930 7471196 11440470 25484157 123045982 123053856 123427199 123404672 123403800 107942546 107925864 107890436 106368831 106414904 106445387 8061883 8084710 102584952 102583830 102621123 100829320 100831199 100843375 107821432 107831163 107788562
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