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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_09g407110v5   uncharacterized protein 
 ath-u.5   AT5G19840   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 
 gma-u.5   100813035   uncharacterized LOC100813035 
 sly-u.5   101266753   lysine-specific demethylase JMJ31 
 osa-u.5   4324716   lysine-specific demethylase JMJ31 
 zma-u.5   100276329   uncharacterized LOC100276329 
 bra-r.6   103856398   hypoxia-inducible factor 1-alpha inhibitor 
 vvi-u.5   100247818   lysine-specific demethylase JMJ31 
 ppo-u.5   7480673   lysine-specific demethylase JMJ31 
 ppo-u.5   7454308   lysine-specific demethylase JMJ31 
 mtr-u.5   11425609   uncharacterized LOC11425609 
 tae-r.2   123079335   uncharacterized LOC123079335 
 tae-r.2   123070951   uncharacterized LOC123070951 
 tae-r.2   123062210   uncharacterized LOC123062210 
 hvu-r.1   123444537   uncharacterized LOC123444537 
 ghi-r.1   107915344   uncharacterized LOC107915344 
 ghi-r.1   107950900   uncharacterized LOC107950900 
 bna-r.1   106386742   uncharacterized LOC106386742 
 bna-r.1   106434419   hypoxia-inducible factor 1-alpha inhibitor 
 sbi-r.1   8072142   uncharacterized LOC8072142 
 sot-r.1   102603065   hypoxia-inducible factor 1-alpha inhibitor 
 cit-r.1   102619012   lysine-specific demethylase JMJ31 
 bdi-r.1   100846207   uncharacterized LOC100846207 
 nta-r.1   107818624   lysine-specific demethylase JMJ31 
 nta-r.1   107764731   lysine-specific demethylase JMJ31 

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Top 50 coexpressed genes to CHLRE_09g407110v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_09g407110v5 (cre-r.1 coexpression data)

CoexMap"5723232"


creCHLRE_09g407110v5 | Entrez gene ID : 5723232    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 1 1 1 1 1 1 2 1 3 1 2 2 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0016706 [list] [network] 2-oxoglutarate-dependent dioxygenase activity  (38 genes)  IEA  
Protein XP_042921493.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 2,  cyto 1,  cysk 1  (predict for XP_042921493.1)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for XP_042921493.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_09g407110v5
ath-u.5
for
AT5G19840
gma-u.5
for
100813035
sly-u.5
for
101266753
osa-u.5
for
4324716
zma-u.5
for
100276329
bra-r.6
for
103856398
vvi-u.5
for
100247818
ppo-u.5
for
7480673
ppo-u.5
for
7454308
mtr-u.5
for
11425609
tae-r.2
for
123079335
tae-r.2
for
123070951
tae-r.2
for
123062210
hvu-r.1
for
123444537
ghi-r.1
for
107915344
ghi-r.1
for
107950900
bna-r.1
for
106386742
bna-r.1
for
106434419
sbi-r.1
for
8072142
sot-r.1
for
102603065
cit-r.1
for
102619012
bdi-r.1
for
100846207
nta-r.1
for
107818624
nta-r.1
for
107764731


Ortholog ID: 9681
Species cre ath gma sly osa zma bra vvi ppo ppo mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_09g407110v5 AT5G19840 LOC100813035 LOC101266753 LOC4324716 LOC100276329 LOC103856398 LOC100247818 LOC7480673 LOC7454308 LOC11425609 LOC123079335 LOC123070951 LOC123062210 LOC123444537 LOC107915344 LOC107950900 LOC106386742 LOC106434419 LOC8072142 LOC102603065 LOC102619012 LOC100846207 LOC107818624 LOC107764731
Function* uncharacterized protein 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein uncharacterized LOC100813035 lysine-specific demethylase JMJ31 lysine-specific demethylase JMJ31 uncharacterized LOC100276329 hypoxia-inducible factor 1-alpha inhibitor lysine-specific demethylase JMJ31 lysine-specific demethylase JMJ31 lysine-specific demethylase JMJ31 uncharacterized LOC11425609 uncharacterized LOC123079335 uncharacterized LOC123070951 uncharacterized LOC123062210 uncharacterized LOC123444537 uncharacterized LOC107915344 uncharacterized LOC107950900 uncharacterized LOC106386742 hypoxia-inducible factor 1-alpha inhibitor uncharacterized LOC8072142 hypoxia-inducible factor 1-alpha inhibitor lysine-specific demethylase JMJ31 uncharacterized LOC100846207 lysine-specific demethylase JMJ31 lysine-specific demethylase JMJ31
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 7
gma03018 RNA degradation 2
gma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00340 Histidine metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi03410 Base excision repair 2
ghi03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00340 Histidine metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi03410 Base excision repair 2
ghi03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00562 Inositol phosphate metabolism 3
bna04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
bdi00240 Pyrimidine metabolism 2
bdi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03050 Proteasome 2
nta03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03450 Non-homologous end-joining 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5723232 832104 100813035 101266753 4324716 100276329 103856398 100247818 7480673 7454308 11425609 123079335 123070951 123062210 123444537 107915344 107950900 106386742 106434419 8072142 102603065 102619012 100846207 107818624 107764731
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