ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cre-r.1	CHLRE_05g237350v5	uncharacterized protein
ath-u.5	EML4	Emsy N Terminus (ENT) domain-containing protein
ath-u.5	EML1	Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein
ath-u.5	EML2	Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein
gma-u.5	100791651	protein EMSY-LIKE 3
gma-u.5	100780512	protein EMSY-LIKE 3
gma-u.5	100811828	protein EMSY-LIKE 3
sly-u.5	101267780	protein EMSY-LIKE 3
sly-u.5	101055531	Hop-interacting protein THI115
sly-u.5	101251479	protein EMSY-LIKE 3-like
osa-u.5	4346600	protein EMSY-LIKE 3
osa-u.5	4346001	protein EMSY-LIKE 3
osa-u.5	4345288	protein EMSY-LIKE 3
zma-u.5	100274024	ENT domain containing protein
zma-u.5	100284072	ENT domain containing protein
zma-u.5	100284576	ENT domain containing protein
bra-r.6	103859430	protein EMSY-LIKE 1
bra-r.6	103858133	protein EMSY-LIKE 4
bra-r.6	103847017	protein EMSY-LIKE 2
vvi-u.5	100853402	protein EMSY-LIKE 4
vvi-u.5	100253804	protein EMSY-LIKE 3
vvi-u.5	100263217	protein EMSY-LIKE 3
ppo-u.5	7489297	protein EMSY-LIKE 3
ppo-u.5	7461395	protein EMSY-LIKE 3
mtr-u.5	11414313	protein EMSY-LIKE 3
mtr-u.5	25483510	protein EMSY-LIKE 1
tae-r.2	123120969	protein EMSY-LIKE 3
tae-r.2	123104175	protein EMSY-LIKE 3
tae-r.2	123103404	protein EMSY-LIKE 3
hvu-r.1	123399416	protein EMSY-LIKE 3-like
hvu-r.1	123451761	protein EMSY-LIKE 3-like
ghi-r.1	107948276	protein EMSY-LIKE 1
ghi-r.1	121220158	protein EMSY-LIKE 3
ghi-r.1	107899744	protein EMSY-LIKE 1
bna-r.1	111198009	protein EMSY-LIKE 1-like
bna-r.1	106351754	protein EMSY-LIKE 1-like
sbi-r.1	8064855	protein EMSY-LIKE 3
sbi-r.1	8069905	protein EMSY-LIKE 3
sbi-r.1	8064023	protein EMSY-LIKE 3
sot-r.1	102589936	protein EMSY-LIKE 3-like
cit-r.1	102616204	protein EMSY-LIKE 3-like
cit-r.1	102631217	protein EMSY-LIKE 1
cit-r.1	102607702	hypothetical protein
bdi-r.1	100824948	protein EMSY-LIKE 3
bdi-r.1	100837286	protein EMSY-LIKE 3
bdi-r.1	100836980	protein EMSY-LIKE 3
nta-r.1	107767252	protein EMSY-LIKE 3
nta-r.1	107769540	protein EMSY-LIKE 3-like
nta-r.1	107794838	protein EMSY-LIKE 3

Top 50 coexpressed genes to CHLRE_05g237350v5 (cre-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to CHLRE_05g237350v5 (cre-r.1 coexpression data)

CoexMap"5723353"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0050832 [list] [network] defense response to fungus

(1 genes)

IEA

GO CC

GO MF

Protein

XP_042924852.1 [sequence] [blastp]
XP_042924853.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, mito 1, chlo 1, cyto 1, plas 1, cyto_mito 1, cyto_plas 1	(predict for XP_042924852.1)
chlo 3, nucl 3, mito 2, cyto_nucl 2	(predict for XP_042924853.1)

Subcellular
localization
TargetP

other 8	(predict for XP_042924852.1)
other 7	(predict for XP_042924853.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_05g237350v5	ath-u.5 for EML4	ath-u.5 for EML1	ath-u.5 for EML2	gma-u.5 for 100791651	gma-u.5 for 100780512	gma-u.5 for 100811828	sly-u.5 for 101267780	sly-u.5 for 101055531	sly-u.5 for 101251479	osa-u.5 for 4346600	osa-u.5 for 4346001	osa-u.5 for 4345288	zma-u.5 for 100274024	zma-u.5 for 100284072	zma-u.5 for 100284576	bra-r.6 for 103859430	bra-r.6 for 103858133	bra-r.6 for 103847017	vvi-u.5 for 100853402	vvi-u.5 for 100253804	vvi-u.5 for 100263217	ppo-u.5 for 7489297	ppo-u.5 for 7461395	mtr-u.5 for 11414313	mtr-u.5 for 25483510	tae-r.2 for 123120969	tae-r.2 for 123104175	tae-r.2 for 123103404	hvu-r.1 for 123399416	hvu-r.1 for 123451761	ghi-r.1 for 107948276	ghi-r.1 for 121220158	ghi-r.1 for 107899744	bna-r.1 for 111198009	bna-r.1 for 106351754	sbi-r.1 for 8064855	sbi-r.1 for 8069905	sbi-r.1 for 8064023	sot-r.1 for 102589936	cit-r.1 for 102616204	cit-r.1 for 102631217	cit-r.1 for 102607702	bdi-r.1 for 100824948	bdi-r.1 for 100837286	bdi-r.1 for 100836980	nta-r.1 for 107767252	nta-r.1 for 107769540	nta-r.1 for 107794838

Ortholog

Ortholog ID: 724

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

CHLRE_05g237350v5

EML4

EML1

EML2

Function^*

uncharacterized protein

Emsy N Terminus (ENT) domain-containing protein

Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein

protein EMSY-LIKE 3

protein EMSY-LIKE 4

protein EMSY-LIKE 1

protein EMSY-LIKE 3

Hop-interacting protein THI115

protein EMSY-LIKE 3

ENT domain containing protein

uncharacterized LOC100193058

protein EMSY-LIKE 2

protein EMSY-LIKE 3

protein EMSY-LIKE 2

protein EMSY-LIKE 3

protein EMSY-LIKE 3-like

protein EMSY-LIKE 3

protein EMSY-LIKE 1

protein EMSY-LIKE 3

protein EMSY-LIKE 1-like

protein EMSY-LIKE 3-like

protein EMSY-LIKE 3

protein EMSY-LIKE 3-like

protein EMSY-LIKE 1

hypothetical protein

protein EMSY-LIKE 3

protein EMSY-LIKE 3-like

protein EMSY-LIKE 3

protein EMSY-LIKE 3-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03460	Fanconi anemia pathway	2
gma03022	Basal transcription factors	2
gma03420	Nucleotide excision repair	2
gma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03083	Polycomb repressive complex	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03022	Basal transcription factors	2
zma04144	Endocytosis	2
zma05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	2
bra03015	mRNA surveillance pathway	2
bra03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2
vvi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	4
ppo03018	RNA degradation	2
ppo04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03050	Proteasome	5
mtr03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03015	mRNA surveillance pathway	6
tae03013	Nucleocytoplasmic transport	4
tae03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03015	mRNA surveillance pathway	3
tae04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	9
ghi03015	mRNA surveillance pathway	7
ghi03040	Spliceosome	7
ghi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04130	SNARE interactions in vesicular transport	2
bna04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00670	One carbon pool by folate	3
bna04981	Folate transport and metabolism	3
bna00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
bna01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	3
sbi03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	3
sbi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03018	RNA degradation	2
sbi03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00941	Flavonoid biosynthesis	6
cit00944	Flavone and flavonol biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	2
bdi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	2

Expression

Expression pattern

Entrez Gene ID^*

5723353

819051

820389

830567

100807441

100785958

100789282

101267780

101055531

101252218

4346001

4345288

4337275

100274024

100284576

100193058

103847017

103855992

103850839

100253804

100263217

100257061

7489297

7461395

18106147

11414313

11446706

123120969

123103404

123121934

123399416

123451761

121220158

107899744

107959329

111198009

125593356

106372384

8069905

8064023

8062031

102591642

102600733

102616204

102631217

102607702

100824948

100837286

100836980

107813144

107814920

107771941

The preparation time of this page was 0.5 [sec].


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	3	3	3	3	3	3	3	2	2	3	2	3	2	3	1	3	3	3

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_05g237350v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_05g237350v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**