ATTED-II : GeneCoexpression result

Species	Gene	Description
cre-r.1	CHLRE_16g658450v5	uncharacterized protein
ath-u.5	emb2738	GTP-binding family protein
gma-u.5	100777588	GTPase Der
sly-u.5	101251249	uncharacterized LOC101251249
osa-u.5	4350988	uncharacterized LOC4350988
zma-u.5	100279896	uncharacterized LOC100279896
bra-r.6	103870279	GTPase Der
vvi-u.5	100260310	uncharacterized LOC100260310
ppo-u.5	7482318	uncharacterized LOC7482318
mtr-u.5	25492568	GTPase Der
tae-r.2	123096204	GTPase Der
tae-r.2	123091234	GTPase Der
tae-r.2	123085949	GTPase Der
hvu-r.1	123442700	GTPase Der
ghi-r.1	121220169	GTPase Der
ghi-r.1	107926226	GTPase Der
bna-r.1	106452517	GTPase Der
bna-r.1	106415543	GTPase Der-like
sbi-r.1	8079157	GTPase Der
sot-r.1	102597805	GTPase Der
cit-r.1	102625125	hypothetical protein
bdi-r.1	100845933	GTPase Der
nta-r.1	107802742	uncharacterized LOC107802742
nta-r.1	107827276	uncharacterized LOC107827276

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0009507 [list] [network] chloroplast

(224 genes)

IEA

GO MF

GO:0005525 [list] [network] GTP binding

(130 genes)

IEA

Protein

XP_042915584.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, cyto 3, chlo_mito 3

(predict for XP_042915584.1)

Subcellular
localization
TargetP

other 4

(predict for XP_042915584.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_16g658450v5	ath-u.5 for emb2738	gma-u.5 for 100777588	sly-u.5 for 101251249	osa-u.5 for 4350988	zma-u.5 for 100279896	bra-r.6 for 103870279	vvi-u.5 for 100260310	ppo-u.5 for 7482318	mtr-u.5 for 25492568	tae-r.2 for 123096204	tae-r.2 for 123091234	tae-r.2 for 123085949	hvu-r.1 for 123442700	ghi-r.1 for 121220169	ghi-r.1 for 107926226	bna-r.1 for 106452517	bna-r.1 for 106415543	sbi-r.1 for 8079157	sot-r.1 for 102597805	cit-r.1 for 102625125	bdi-r.1 for 100845933	nta-r.1 for 107802742	nta-r.1 for 107827276

Ortholog

Ortholog ID: 10757

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

emb2738

Function^*

uncharacterized protein

GTP-binding family protein

GTPase Der

uncharacterized LOC101251249

uncharacterized LOC4350988

uncharacterized LOC100279896

GTPase Der

uncharacterized LOC100260310

uncharacterized LOC7482318

GTPase Der

GTPase Der-like

GTPase Der

hypothetical protein

GTPase Der

uncharacterized LOC107802742

uncharacterized LOC107827276

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00970	Aminoacyl-tRNA biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03018	RNA degradation	4
bra03040	Spliceosome	2
bra04141	Protein processing in endoplasmic reticulum	2
bra04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	2
vvi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03060	Protein export	2
mtr00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00970	Aminoacyl-tRNA biosynthesis	3
tae00220	Arginine biosynthesis	2
tae00330	Arginine and proline metabolism	2
tae04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00220	Arginine biosynthesis	2
bna00330	Arginine and proline metabolism	2
bna04626	Plant-pathogen interaction	2
bna00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03018	RNA degradation	2
bdi00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00970	Aminoacyl-tRNA biosynthesis	2
nta00030	Pentose phosphate pathway	2
nta00710	Carbon fixation by Calvin cycle	2
nta01200	Carbon metabolism	2
nta01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00620	Pyruvate metabolism	2
nta00970	Aminoacyl-tRNA biosynthesis	2
nta00906	Carotenoid biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

5723471

820382

100777588

101251249

4350988

100279896

103870279

100260310

7482318

25492568

123096204

123091234

123085949

123442700

121220169

107926226

106452517

106415543

8079157

102597805

102625125

100845933

107802742

107827276

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to CHLRE_16g658450v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_16g658450v5 (cre-r.1 coexpression data)


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	1	1	1	1	1	1	1	1	1	3	1	2	2	1	1	1	1	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_16g658450v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_16g658450v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**