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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_06g278101v5   uncharacterized protein 
 ath-u.5   SR   serine racemase 
 gma-u.5   100799758   serine racemase 
 sly-u.5   101252608   serine racemase 
 sly-u.5   101252307   serine racemase-like 
 osa-u.5   4336624   serine racemase-like 
 zma-u.5   100216615   Serine racemase 
 bra-r.6   103853518   serine racemase 
 vvi-u.5   100247899   serine racemase 
 ppo-u.5   7478049   serine racemase 
 mtr-u.5   11444153   serine racemase 
 tae-r.2   123046374   serine racemase 
 tae-r.2   123049764   serine racemase 
 tae-r.2   123190110   serine racemase 
 hvu-r.1   123430675   serine racemase 
 ghi-r.1   107947019   serine racemase 
 ghi-r.1   107894099   serine racemase 
 bna-r.1   125605327   serine racemase-like 
 bna-r.1   106397082   serine racemase 
 bna-r.1   106396929   serine racemase 
 sbi-r.1   110436334   serine racemase 
 sot-r.1   102594901   serine racemase 
 sot-r.1   102595236   serine racemase-like 
 sot-r.1   102605212   serine racemase-like 
 cit-r.1   102614630   serine racemase 
 bdi-r.1   100839879   serine racemase 
 nta-r.1   107781728   serine racemase 
 nta-r.1   107828409   serine racemase 

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Top 50 coexpressed genes to CHLRE_06g278101v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_06g278101v5 (cre-r.1 coexpression data)

CoexMap"5723595"


creCHLRE_06g278101v5 | Entrez gene ID : 5723595      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 1 2 1 1 1 1 1 1 3 1 2 3 1 3 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre00260 [list] [network] Glycine, serine and threonine metabolism (35 genes)
cre00470 [list] [network] D-Amino acid metabolism (7 genes)
GO BP
GO:0042866 [list] [network] pyruvate biosynthetic process  (1 genes)  IEA  
GO:0070179 [list] [network] D-serine biosynthetic process  (1 genes)  IEA  
GO:0006563 [list] [network] L-serine metabolic process  (16 genes)  IEA  
GO CC
GO MF
GO:0018114 [list] [network] threonine racemase activity  (1 genes)  IEA  
GO:0030378 [list] [network] serine racemase activity  (1 genes)  IEA  
GO:0003941 [list] [network] L-serine ammonia-lyase activity  (2 genes)  IEA  
GO:0008721 [list] [network] D-serine ammonia-lyase activity  (2 genes)  IEA  
GO:0000287 [list] [network] magnesium ion binding  (45 genes)  IEA  
GO:0030170 [list] [network] pyridoxal phosphate binding  (46 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1223 genes)  IEA  
Protein XP_001698112.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  pero 4  (predict for XP_001698112.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for XP_001698112.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_06g278101v5
ath-u.5
for
SR
gma-u.5
for
100799758
sly-u.5
for
101252608
sly-u.5
for
101252307
osa-u.5
for
4336624
zma-u.5
for
100216615
bra-r.6
for
103853518
vvi-u.5
for
100247899
ppo-u.5
for
7478049
mtr-u.5
for
11444153
tae-r.2
for
123046374
tae-r.2
for
123049764
tae-r.2
for
123190110
hvu-r.1
for
123430675
ghi-r.1
for
107947019
ghi-r.1
for
107894099
bna-r.1
for
125605327
bna-r.1
for
106397082
bna-r.1
for
106396929
sbi-r.1
for
110436334
sot-r.1
for
102594901
sot-r.1
for
102595236
sot-r.1
for
102605212
cit-r.1
for
102614630
bdi-r.1
for
100839879
nta-r.1
for
107781728
nta-r.1
for
107828409


Ortholog ID: 6924
Species cre ath gma sly sly osa zma bra vvi ppo mtr tae tae tae hvu ghi ghi bna bna bna sbi sot sot sot cit bdi nta nta
Symbol CHLRE_06g278101v5 SR LOC100799758 LOC101252608 LOC101252307 LOC4336624 LOC100216615 LOC103853518 LOC100247899 LOC7478049 LOC11444153 LOC123046374 LOC123049764 LOC123190110 LOC123430675 LOC107947019 LOC107894099 LOC125605327 LOC106397082 LOC106396929 LOC110436334 LOC102594901 LOC102595236 LOC102605212 LOC102614630 LOC100839879 LOC107781728 LOC107828409
Function* uncharacterized protein serine racemase serine racemase serine racemase serine racemase-like serine racemase-like Serine racemase serine racemase serine racemase serine racemase serine racemase serine racemase serine racemase serine racemase serine racemase serine racemase serine racemase serine racemase-like serine racemase serine racemase serine racemase serine racemase serine racemase-like serine racemase-like serine racemase serine racemase serine racemase serine racemase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00260 Glycine, serine and threonine metabolism 2
sly00470 D-Amino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00260 Glycine, serine and threonine metabolism 2
sly00470 D-Amino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
ppo04016 MAPK signaling pathway - plant 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00260 Glycine, serine and threonine metabolism 3
tae00470 D-Amino acid metabolism 3
tae04144 Endocytosis 2
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae00260 Glycine, serine and threonine metabolism 3
tae00470 D-Amino acid metabolism 3
tae00630 Glyoxylate and dicarboxylate metabolism 3
tae00650 Butanoate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae00260 Glycine, serine and threonine metabolism 3
tae00470 D-Amino acid metabolism 3
tae00510 N-Glycan biosynthesis 2
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 3
ghi00260 Glycine, serine and threonine metabolism 2
ghi00470 D-Amino acid metabolism 2
ghi00480 Glutathione metabolism 2
ghi00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00790 Folate biosynthesis 3
ghi01240 Biosynthesis of cofactors 3
ghi00260 Glycine, serine and threonine metabolism 2
ghi00470 D-Amino acid metabolism 2
ghi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 3
bna00470 D-Amino acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 3
bna00470 D-Amino acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 3
bna00470 D-Amino acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00260 Glycine, serine and threonine metabolism 3
sot00470 D-Amino acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00260 Glycine, serine and threonine metabolism 3
sot00470 D-Amino acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00260 Glycine, serine and threonine metabolism 3
sot00470 D-Amino acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 3
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
nta00470 D-Amino acid metabolism 2
nta00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 3
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
nta00470 D-Amino acid metabolism 2
nta00240 Pyrimidine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5723595 826769 100799758 101252608 101252307 4336624 100216615 103853518 100247899 7478049 11444153 123046374 123049764 123190110 123430675 107947019 107894099 125605327 106397082 106396929 110436334 102594901 102595236 102605212 102614630 100839879 107781728 107828409
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