ATTED-II : GeneCoexpression result

Species	Gene	Description
cre-r.1	CHLRE_06g278205v5	uncharacterized protein
ath-u.5	AT2G16405	Transducin/WD40 repeat-like superfamily protein
gma-u.5	100795887	WD repeat-containing protein 13
gma-u.5	100792346	WD repeat-containing protein 13
sly-u.5	101247167	uncharacterized LOC101247167
osa-u.5	4327892	uncharacterized LOC4327892
zma-u.5	100192985	Transducin/WD40 repeat-like superfamily protein
bra-r.6	117127166	uncharacterized LOC117127166
vvi-u.5	100258922	uncharacterized LOC100258922
ppo-u.5	7470016	uncharacterized LOC7470016
mtr-u.5	25501070	WD repeat-containing protein 13
tae-r.2	123076346	uncharacterized LOC123076346
tae-r.2	123062229	WD repeat-containing protein 13
tae-r.2	123070973	WD repeat-containing protein 13
hvu-r.1	123441939	WD repeat-containing protein 13
ghi-r.1	107928930	WD repeat-containing protein 13
ghi-r.1	107949394	WD repeat-containing protein 13
ghi-r.1	107936945	WD repeat-containing protein 13
bna-r.1	106355936	uncharacterized LOC106355936
bna-r.1	106360295	CDPK-related kinase 5-like
sbi-r.1	8054697	WD repeat-containing protein 13
sot-r.1	102586888	WD repeat-containing protein 13
cit-r.1	102621717	uncharacterized LOC102621717
bdi-r.1	100841429	WD repeat-containing protein 13
nta-r.1	107783647	uncharacterized LOC107783647
nta-r.1	107828283	uncharacterized LOC107828283

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005634 [list] [network] nucleus

(1576 genes)

IEA

GO MF

GO:1990841 [list] [network] promoter-specific chromatin binding	(2 genes)	IEA
GO:0005515 [list] [network] protein binding	(1927 genes)	IEA

Protein

XP_042923840.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, nucl 2, chlo 1, nucl_plas 1

(predict for XP_042923840.1)

Subcellular
localization
TargetP

other 7, chlo 5

(predict for XP_042923840.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_06g278205v5	ath-u.5 for AT2G16405	gma-u.5 for 100795887	gma-u.5 for 100792346	sly-u.5 for 101247167	osa-u.5 for 4327892	zma-u.5 for 100192985	bra-r.6 for 117127166	vvi-u.5 for 100258922	ppo-u.5 for 7470016	mtr-u.5 for 25501070	tae-r.2 for 123076346	tae-r.2 for 123062229	tae-r.2 for 123070973	hvu-r.1 for 123441939	ghi-r.1 for 107928930	ghi-r.1 for 107949394	ghi-r.1 for 107936945	bna-r.1 for 106355936	bna-r.1 for 106360295	sbi-r.1 for 8054697	sot-r.1 for 102586888	cit-r.1 for 102621717	bdi-r.1 for 100841429	nta-r.1 for 107783647	nta-r.1 for 107828283

Ortholog

Ortholog ID: 7150

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

Function^*

uncharacterized protein

Transducin/WD40 repeat-like superfamily protein

WD repeat-containing protein 13

uncharacterized LOC101247167

uncharacterized LOC4327892

Transducin/WD40 repeat-like superfamily protein

uncharacterized LOC117127166

uncharacterized LOC100258922

uncharacterized LOC7470016

WD repeat-containing protein 13

uncharacterized LOC123076346

WD repeat-containing protein 13

WD repeat-containing protein 13-like

WD repeat-containing protein 13

uncharacterized LOC102621717

WD repeat-containing protein 13

uncharacterized LOC107783647

uncharacterized LOC107828283

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00071	Fatty acid degradation	3
gma00592	alpha-Linolenic acid metabolism	3
gma01212	Fatty acid metabolism	3
gma04626	Plant-pathogen interaction	2
gma00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04145	Phagosome	2
gma00010	Glycolysis / Gluconeogenesis	2
gma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	4
sly00190	Oxidative phosphorylation	2
sly04142	Lysosome	2
sly04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04144	Endocytosis	2
mtr03013	Nucleocytoplasmic transport	2
mtr04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	2
tae04144	Endocytosis	2
tae05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00564	Glycerophospholipid metabolism	4
ghi00565	Ether lipid metabolism	4
ghi04144	Endocytosis	4
ghi03015	mRNA surveillance pathway	2
ghi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00564	Glycerophospholipid metabolism	4
ghi00565	Ether lipid metabolism	4
ghi04144	Endocytosis	4
ghi03015	mRNA surveillance pathway	2
ghi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03050	Proteasome	3
bna04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03015	mRNA surveillance pathway	3
sot04382	Cornified envelope formation	2
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04142	Lysosome	5
nta03015	mRNA surveillance pathway	4
nta04382	Cornified envelope formation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	4
nta04382	Cornified envelope formation	4
nta04142	Lysosome	3
nta04136	Autophagy - other	2

Expression

Expression pattern

Entrez Gene ID^*

5723632

816138

100795887

100792346

101247167

4327892

100192985

117127166

100258922

7470016

25501070

123076346

123062229

123070973

123441939

107928930

107949394

107936945

106433686

106411531

8054697

102586888

102621717

100841429

107783647

107828283

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to CHLRE_06g278205v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_06g278205v5 (cre-r.1 coexpression data)


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	1	2	1	1	1	1	1	1	1	3	1	3	2	1	1	1	1	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_06g278205v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_06g278205v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**