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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_16g653850v5   uncharacterized protein 
 gma-u.5   100500529   diphthamide biosynthesis protein 3 
 sly-u.5   101257312   diphthamide biosynthesis protein 3 
 osa-u.5   4341747   diphthamide biosynthesis protein 3 
 zma-u.5   100280569   diphthamide biosynthesis protein 3 
 zma-u.5   100286315   diphthamide biosynthesis protein 3 
 bra-r.6   103860438   diphthamide biosynthesis protein 3 
 bra-r.6   103844332   diphthamide biosynthesis protein 3 
 vvi-u.5   104877347   diphthamide biosynthesis protein 3 
 ppo-u.5   7457508   diphthamide biosynthesis protein 3 
 mtr-u.5   11422049   diphthamide biosynthesis protein 3 
 tae-r.2   123164466   diphthamide biosynthesis protein 3 
 tae-r.2   123156174   diphthamide biosynthesis protein 3 
 tae-r.2   123149315   diphthamide biosynthesis protein 3 
 hvu-r.1   123407306   diphthamide biosynthesis protein 3 
 ghi-r.1   121224645   diphthamide biosynthesis protein 3 
 bna-r.1   106445621   diphthamide biosynthesis protein 3 
 bna-r.1   106439856   diphthamide biosynthesis protein 3 
 bna-r.1   106436948   diphthamide biosynthesis protein 3 
 sbi-r.1   8069378   diphthamide biosynthesis protein 3 
 sot-r.1   102595984   diphthamide biosynthesis protein 3 
 cit-r.1   102619112   diphthamide biosynthesis protein 3 

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Top 50 coexpressed genes to CHLRE_16g653850v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_16g653850v5 (cre-r.1 coexpression data)

CoexMap"5723696"


creCHLRE_16g653850v5 | Entrez gene ID : 5723696    
Species cre gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit nta bdi ath
Paralog 1 1 1 1 2 2 1 1 1 3 1 1 3 1 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0017183 [list] [network] protein histidyl modification to diphthamide  (5 genes)  IEA  
GO CC
GO MF
GO:0046872 [list] [network] metal ion binding  (704 genes)  IEA  
Protein XP_001698139.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  extr 2,  nucl 1,  mito 1,  cysk 1,  cysk_nucl 1  (predict for XP_001698139.2)
Subcellular
localization
TargetP
other 8  (predict for XP_001698139.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_16g653850v5
gma-u.5
for
100500529
sly-u.5
for
101257312
osa-u.5
for
4341747
zma-u.5
for
100280569
zma-u.5
for
100286315
bra-r.6
for
103860438
bra-r.6
for
103844332
vvi-u.5
for
104877347
ppo-u.5
for
7457508
mtr-u.5
for
11422049
tae-r.2
for
123164466
tae-r.2
for
123156174
tae-r.2
for
123149315
hvu-r.1
for
123407306
ghi-r.1
for
121224645
bna-r.1
for
106445621
bna-r.1
for
106439856
bna-r.1
for
106436948
sbi-r.1
for
8069378
sot-r.1
for
102595984
cit-r.1
for
102619112


Ortholog ID: 11169
Species cre gma sly osa zma zma bra bra vvi ppo mtr tae tae tae hvu ghi bna bna bna sbi sot cit
Symbol CHLRE_16g653850v5 LOC100500529 LOC101257312 LOC4341747 LOC100280569 LOC100286315 LOC103860438 LOC103844332 LOC104877347 LOC7457508 LOC11422049 LOC123164466 LOC123156174 LOC123149315 LOC123407306 LOC121224645 LOC106445621 LOC106439856 LOC106436948 LOC8069378 LOC102595984 LOC102619112
Function* uncharacterized protein diphthamide biosynthesis protein 3 diphthamide biosynthesis protein 3 diphthamide biosynthesis protein 3 diphthamide biosynthesis protein 3 diphthamide biosynthesis protein 3 diphthamide biosynthesis protein 3 diphthamide biosynthesis protein 3 diphthamide biosynthesis protein 3 diphthamide biosynthesis protein 3 diphthamide biosynthesis protein 3 diphthamide biosynthesis protein 3 diphthamide biosynthesis protein 3 diphthamide biosynthesis protein 3 diphthamide biosynthesis protein 3 diphthamide biosynthesis protein 3 diphthamide biosynthesis protein 3 diphthamide biosynthesis protein 3 diphthamide biosynthesis protein 3 diphthamide biosynthesis protein 3 diphthamide biosynthesis protein 3 diphthamide biosynthesis protein 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 3
osa03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00730 Thiamine metabolism 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00790 Folate biosynthesis 3
tae01240 Biosynthesis of cofactors 3
tae04122 Sulfur relay system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
ghi04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 4
sbi03050 Proteasome 2
sbi03083 Polycomb repressive complex 2
sbi04120 Ubiquitin mediated proteolysis 2
sbi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5723696 100500529 101257312 4341747 100280569 100286315 103860438 103844332 104877347 7457508 11422049 123164466 123156174 123149315 123407306 121224645 106445621 106439856 106436948 8069378 102595984 102619112
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