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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_10g459500v5   uncharacterized protein 
 ath-u.5   AT1G50920   Nucleolar GTP-binding protein 
 gma-u.5   100795311   nucleolar GTP-binding protein 1 
 gma-u.5   100784033   nucleolar GTP-binding protein 1 
 sly-u.5   101254633   nucleolar GTP-binding protein 1 
 sly-u.5   101249658   nucleolar GTP-binding protein 1-like 
 osa-u.5   4342225   nucleolar GTP-binding protein 1 
 osa-u.5   4340389   nucleolar GTP-binding protein 1 
 zma-u.5   100273647   uncharacterized LOC100273647 
 zma-u.5   103629872   nucleolar GTP-binding protein 1 
 bra-r.6   103844227   nucleolar GTP-binding protein 1 
 bra-r.6   103836559   nucleolar GTP-binding protein 1 
 vvi-u.5   100258794   nucleolar GTP-binding protein 1 
 vvi-u.5   100254321   nucleolar GTP-binding protein 1 
 ppo-u.5   7465153   nucleolar GTP-binding protein 1 
 ppo-u.5   7482322   nucleolar GTP-binding protein 1 
 mtr-u.5   11419905   nucleolar GTP-binding protein 1 
 mtr-u.5   25487251   nucleolar GTP-binding protein 1 
 tae-r.2   123119279   nucleolar GTP-binding protein 1 
 tae-r.2   123151246   nucleolar GTP-binding protein 1 
 tae-r.2   123158655   nucleolar GTP-binding protein 1 
 hvu-r.1   123407475   nucleolar GTP-binding protein 1-like 
 ghi-r.1   107949507   nucleolar GTP-binding protein 1 
 ghi-r.1   107952121   nucleolar GTP-binding protein 1 
 bna-r.1   106424308   nucleolar GTP-binding protein 1-like 
 bna-r.1   106350522   nucleolar GTP-binding protein 1 
 bna-r.1   106370990   nucleolar GTP-binding protein 1 
 sbi-r.1   110430935   nucleolar GTP-binding protein 1-like 
 sot-r.1   102605631   nucleolar GTP-binding protein 1-like 
 cit-r.1   102614112   nucleolar GTP-binding protein 1-like 
 bdi-r.1   100839587   nucleolar GTP-binding protein 1 
 nta-r.1   107827460   nucleolar GTP-binding protein 1-like 
 nta-r.1   107807905   nucleolar GTP-binding protein 1 
 nta-r.1   107799397   nucleolar GTP-binding protein 1 

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Top 50 coexpressed genes to CHLRE_10g459500v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_10g459500v5 (cre-r.1 coexpression data)

CoexMap"5724139"


creCHLRE_10g459500v5 | Entrez gene ID : 5724139      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 2 2 2 2 2 2 2 3 1 2 3 1 1 1 1 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03008 [list] [network] Ribosome biogenesis in eukaryotes (47 genes)
GO BP
GO:0042273 [list] [network] ribosomal large subunit biogenesis  (52 genes)  IEA  
GO CC
GO:0005730 [list] [network] nucleolus  (152 genes)  IEA  
GO MF
GO:0003924 [list] [network] GTPase activity  (103 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (130 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (670 genes)  IEA  
Protein XP_042920522.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_042920522.1)
Subcellular
localization
TargetP
other 7  (predict for XP_042920522.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_10g459500v5
ath-u.5
for
AT1G50920
gma-u.5
for
100795311
gma-u.5
for
100784033
sly-u.5
for
101254633
sly-u.5
for
101249658
osa-u.5
for
4342225
osa-u.5
for
4340389
zma-u.5
for
100273647
zma-u.5
for
103629872
bra-r.6
for
103844227
bra-r.6
for
103836559
vvi-u.5
for
100258794
vvi-u.5
for
100254321
ppo-u.5
for
7465153
ppo-u.5
for
7482322
mtr-u.5
for
11419905
mtr-u.5
for
25487251
tae-r.2
for
123119279
tae-r.2
for
123151246
tae-r.2
for
123158655
hvu-r.1
for
123407475
ghi-r.1
for
107949507
ghi-r.1
for
107952121
bna-r.1
for
106424308
bna-r.1
for
106350522
bna-r.1
for
106370990
sbi-r.1
for
110430935
sot-r.1
for
102605631
cit-r.1
for
102614112
bdi-r.1
for
100839587
nta-r.1
for
107827460
nta-r.1
for
107807905
nta-r.1
for
107799397


Ortholog ID: 5192
Species cre ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae tae hvu ghi ghi bna bna bna sbi sot cit bdi nta nta nta
Symbol CHLRE_10g459500v5 AT1G50920 LOC100795311 LOC100784033 LOC101254633 LOC101249658 LOC4342225 LOC4340389 LOC100273647 LOC103629872 LOC103844227 LOC103836559 LOC100258794 LOC100254321 LOC7465153 LOC7482322 LOC11419905 LOC25487251 LOC123151246 LOC123158655 LOC123095678 LOC123407475 LOC107949507 LOC107952121 LOC106370990 LOC111205437 LOC106410783 LOC110430935 LOC102605631 LOC102614112 LOC100839587 LOC107827460 LOC107807905 LOC107799397
Function* uncharacterized protein Nucleolar GTP-binding protein nucleolar GTP-binding protein 1 nucleolar GTP-binding protein 1 nucleolar GTP-binding protein 1 nucleolar GTP-binding protein 1-like nucleolar GTP-binding protein 1 nucleolar GTP-binding protein 1 uncharacterized LOC100273647 nucleolar GTP-binding protein 1 nucleolar GTP-binding protein 1 nucleolar GTP-binding protein 1 nucleolar GTP-binding protein 1 nucleolar GTP-binding protein 1 nucleolar GTP-binding protein 1 nucleolar GTP-binding protein 1 nucleolar GTP-binding protein 1 nucleolar GTP-binding protein 1 nucleolar GTP-binding protein 1 nucleolar GTP-binding protein 1 nucleolar GTP-binding protein 1 nucleolar GTP-binding protein 1-like nucleolar GTP-binding protein 1 nucleolar GTP-binding protein 1 nucleolar GTP-binding protein 1 nucleolar GTP-binding protein 1-like nucleolar GTP-binding protein 1 nucleolar GTP-binding protein 1-like nucleolar GTP-binding protein 1-like nucleolar GTP-binding protein 1-like nucleolar GTP-binding protein 1 nucleolar GTP-binding protein 1-like nucleolar GTP-binding protein 1 nucleolar GTP-binding protein 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 6
cre00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
cre03010 Ribosome 2
cre00220 Arginine biosynthesis 2
cre00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00564 Glycerophospholipid metabolism 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
sly04141 Protein processing in endoplasmic reticulum 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
sly03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 5
zma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 7
bra03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo01232 Nucleotide metabolism 2
ppo01240 Biosynthesis of cofactors 2
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 7
ppo03040 Spliceosome 4
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 8
bna03082 ATP-dependent chromatin remodeling 2
bna00220 Arginine biosynthesis 2
bna00240 Pyrimidine metabolism 2
bna00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 8
bna03082 ATP-dependent chromatin remodeling 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi03015 mRNA surveillance pathway 3
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5724139 841514 100795311 100784033 101254633 101249658 4342225 4340389 100273647 103629872 103844227 103836559 100258794 100254321 7465153 7482322 11419905 25487251 123151246 123158655 123095678 123407475 107949507 107952121 106370990 111205437 106410783 110430935 102605631 102614112 100839587 107827460 107807905 107799397
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