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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_16g689535v5   uncharacterized protein 
 ath-u.5   ZFN2   zinc finger nuclease 2 
 ath-u.5   ZFN1   zinc finger protein 1 
 ath-u.5   ZFN3   zinc finger nuclease 3 
 gma-u.5   100812856   zinc finger CCCH domain-containing protein 3 
 gma-u.5   100802536   zinc finger CCCH domain-containing protein ZFN-like 
 gma-u.5   100792928   zinc finger CCCH domain-containing protein 3 
 sly-u.5   101255551   zinc finger CCCH domain-containing protein ZFN-like 
 osa-u.5   4324354   zinc finger CCCH domain-containing protein 12-like 
 osa-u.5   4350492   zinc finger CCCH domain-containing protein 63-like 
 osa-u.5   4352041   zinc finger CCCH domain-containing protein 66-like 
 zma-u.5   100191923   uncharacterized LOC100191923 
 zma-u.5   100194377   uncharacterized LOC100194377 
 zma-u.5   100283646   zinc finger CCCH type domain-containing protein ZFN-like 2 
 bra-r.6   103865234   zinc finger CCCH domain-containing protein 26 
 bra-r.6   103844187   zinc finger CCCH domain-containing protein 3 
 bra-r.6   103857463   zinc finger CCCH domain-containing protein 26 
 vvi-u.5   100254791   zinc finger CCCH domain-containing protein ZFN-like 
 vvi-u.5   100246519   zinc finger CCCH domain-containing protein 3 
 ppo-u.5   7491104   zinc finger CCCH domain-containing protein ZFN-like 
 ppo-u.5   18104241   zinc finger CCCH domain-containing protein ZFN-like 
 ppo-u.5   7458282   zinc finger CCCH domain-containing protein 3 
 mtr-u.5   11410286   zinc finger CCCH domain-containing protein ZFN-like 
 mtr-u.5   11435155   zinc finger CCCH domain-containing protein 3 
 tae-r.2   123071964   zinc finger CCCH domain-containing protein 12 
 tae-r.2   123080269   zinc finger CCCH domain-containing protein 12 
 hvu-r.1   123451971   zinc finger CCCH domain-containing protein 66-like 
 hvu-r.1   123445209   zinc finger CCCH domain-containing protein 12-like 
 ghi-r.1   107954044   zinc finger CCCH domain-containing protein 3 
 ghi-r.1   107954042   zinc finger CCCH domain-containing protein 3 
 ghi-r.1   107952776   zinc finger CCCH domain-containing protein 3 
 bna-r.1   125587398   zinc finger CCCH domain-containing protein 3-like 
 bna-r.1   125584254   zinc finger CCCH domain-containing protein 26-like 
 bna-r.1   111206326   zinc finger CCCH domain-containing protein 33-like 
 sbi-r.1   8064417   zinc finger CCCH domain-containing protein 63 
 sbi-r.1   110433908   zinc finger CCCH domain-containing protein 12-like 
 sot-r.1   102597110   zinc finger CCCH domain-containing protein ZFN-like 
 cit-r.1   102610029   zinc finger CCCH domain-containing protein 3 
 cit-r.1   102619714   zinc finger CCCH domain-containing protein ZFN-like 
 bdi-r.1   100845537   zinc finger CCCH domain-containing protein 63 
 bdi-r.1   100842022   zinc finger CCCH domain-containing protein 12 
 bdi-r.1   100841070   zinc finger CCCH domain-containing protein 66 
 nta-r.1   107764729   zinc finger CCCH domain-containing protein ZFN-like 
 nta-r.1   107763928   zinc finger CCCH domain-containing protein ZFN-like 
 nta-r.1   107802347   zinc finger CCCH domain-containing protein ZFN-like 

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Top 50 coexpressed genes to CHLRE_16g689535v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_16g689535v5 (cre-r.1 coexpression data)

CoexMap"5724460"


creCHLRE_16g689535v5 | Entrez gene ID : 5724460    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 3 3 1 3 3 3 2 3 2 2 2 3 3 2 1 2 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (109 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (704 genes)  IEA  
Protein XP_042916314.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  mito 2,  pero 1,  mito_plas 1  (predict for XP_042916314.1)
Subcellular
localization
TargetP
other 8  (predict for XP_042916314.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_16g689535v5
ath-u.5
for
ZFN2
ath-u.5
for
ZFN1
ath-u.5
for
ZFN3
gma-u.5
for
100812856
gma-u.5
for
100802536
gma-u.5
for
100792928
sly-u.5
for
101255551
osa-u.5
for
4324354
osa-u.5
for
4350492
osa-u.5
for
4352041
zma-u.5
for
100191923
zma-u.5
for
100194377
zma-u.5
for
100283646
bra-r.6
for
103865234
bra-r.6
for
103844187
bra-r.6
for
103857463
vvi-u.5
for
100254791
vvi-u.5
for
100246519
ppo-u.5
for
7491104
ppo-u.5
for
18104241
ppo-u.5
for
7458282
mtr-u.5
for
11410286
mtr-u.5
for
11435155
tae-r.2
for
123071964
tae-r.2
for
123080269
hvu-r.1
for
123451971
hvu-r.1
for
123445209
ghi-r.1
for
107954044
ghi-r.1
for
107954042
ghi-r.1
for
107952776
bna-r.1
for
125587398
bna-r.1
for
125584254
bna-r.1
for
111206326
sbi-r.1
for
8064417
sbi-r.1
for
110433908
sot-r.1
for
102597110
cit-r.1
for
102610029
cit-r.1
for
102619714
bdi-r.1
for
100845537
bdi-r.1
for
100842022
bdi-r.1
for
100841070
nta-r.1
for
107764729
nta-r.1
for
107763928
nta-r.1
for
107802347


Ortholog ID: 1490
Species cre ath ath gma gma gma sly osa osa osa zma zma zma bra bra vvi vvi ppo ppo ppo mtr mtr tae tae hvu hvu ghi ghi ghi bna bna sbi sbi sot cit cit bdi bdi bdi nta nta nta
Symbol CHLRE_16g689535v5 ZFN3 AT1G04990 LOC100812856 LOC100785411 LOC100786261 LOC101255551 LOC4324354 LOC4350492 LOC4352041 LOC100191923 LOC100194377 LOC100273243 LOC103857463 LOC103858986 LOC100254791 LOC100246519 LOC7491104 LOC18104241 LOC7458282 LOC11410286 LOC11435155 LOC123071964 LOC123080269 LOC123451971 LOC123445209 LOC107920166 LOC107954710 LOC121232140 LOC106402310 LOC106423845 LOC8064417 LOC110433908 LOC102597110 LOC102610029 LOC102619714 LOC100845537 LOC100842022 LOC100841070 LOC107763928 LOC107802347 LOC107798134
Function* uncharacterized protein zinc finger nuclease 3 Zinc finger C-x8-C-x5-C-x3-H type family protein zinc finger CCCH domain-containing protein 3 zinc finger CCCH domain-containing protein ZFN-like zinc finger CCCH domain-containing protein ZFN-like zinc finger CCCH domain-containing protein ZFN-like zinc finger CCCH domain-containing protein 12-like zinc finger CCCH domain-containing protein 63-like zinc finger CCCH domain-containing protein 66-like uncharacterized LOC100191923 uncharacterized LOC100194377 Zinc finger CCCH domain-containing protein 33 zinc finger CCCH domain-containing protein 26 zinc finger CCCH domain-containing protein 33 zinc finger CCCH domain-containing protein ZFN-like zinc finger CCCH domain-containing protein 3 zinc finger CCCH domain-containing protein ZFN-like zinc finger CCCH domain-containing protein ZFN-like zinc finger CCCH domain-containing protein 3 zinc finger CCCH domain-containing protein ZFN-like zinc finger CCCH domain-containing protein 3 zinc finger CCCH domain-containing protein 12 zinc finger CCCH domain-containing protein 12 zinc finger CCCH domain-containing protein 66-like zinc finger CCCH domain-containing protein 12-like zinc finger CCCH domain-containing protein ZFN-like zinc finger CCCH domain-containing protein 3 zinc finger CCCH domain-containing protein 3 zinc finger CCCH domain-containing protein 3 zinc finger CCCH domain-containing protein 33-like zinc finger CCCH domain-containing protein 63 zinc finger CCCH domain-containing protein 12-like zinc finger CCCH domain-containing protein ZFN-like zinc finger CCCH domain-containing protein 3 zinc finger CCCH domain-containing protein ZFN-like zinc finger CCCH domain-containing protein 63 zinc finger CCCH domain-containing protein 12 zinc finger CCCH domain-containing protein 66 zinc finger CCCH domain-containing protein ZFN-like zinc finger CCCH domain-containing protein ZFN-like zinc finger CCCH domain-containing protein ZFN-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 2
ath00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04070 Phosphatidylinositol signaling system 3
ath00480 Glutathione metabolism 2
ath04146 Peroxisome 2
ath04016 MAPK signaling pathway - plant 2
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04146 Peroxisome 2
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00280 Valine, leucine and isoleucine degradation 2
osa01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00280 Valine, leucine and isoleucine degradation 2
osa00650 Butanoate metabolism 2
osa04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00280 Valine, leucine and isoleucine degradation 3
osa00650 Butanoate metabolism 2
osa04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00510 N-Glycan biosynthesis 5
vvi00513 Various types of N-glycan biosynthesis 5
vvi04141 Protein processing in endoplasmic reticulum 5
vvi00520 Amino sugar and nucleotide sugar metabolism 2
vvi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00541 Biosynthesis of various nucleotide sugars 2
ppo01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04145 Phagosome 2
ppo04517 IgSF CAM signaling 2
ppo04814 Motor proteins 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 4
mtr01200 Carbon metabolism 3
mtr00220 Arginine biosynthesis 2
mtr00250 Alanine, aspartate and glutamate metabolism 2
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00630 Glyoxylate and dicarboxylate metabolism 2
hvu00620 Pyruvate metabolism 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00670 One carbon pool by folate 2
ghi04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00410 beta-Alanine metabolism 2
ghi00640 Propanoate metabolism 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 3
ghi00410 beta-Alanine metabolism 2
ghi00640 Propanoate metabolism 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 4
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00360 Phenylalanine metabolism 3
cit00940 Phenylpropanoid biosynthesis 3
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 10
bdi00630 Glyoxylate and dicarboxylate metabolism 7
bdi00710 Carbon fixation by Calvin cycle 6
bdi01230 Biosynthesis of amino acids 5
bdi00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 4
bdi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5724460 831516 839351 100812856 100785411 100786261 101255551 4324354 4350492 4352041 100191923 100194377 100273243 103857463 103858986 100254791 100246519 7491104 18104241 7458282 11410286 11435155 123071964 123080269 123451971 123445209 107920166 107954710 121232140 106402310 106423845 8064417 110433908 102597110 102610029 102619714 100845537 100842022 100841070 107763928 107802347 107798134
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