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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_16g682587v5   uncharacterized protein 
 ath-u.5   AT4G21192   Cytochrome c oxidase biogenesis protein Cmc1-like protein 
 gma-u.5   100789163   COX assembly mitochondrial protein 2 homolog 
 gma-u.5   100785247   COX assembly mitochondrial protein 2 homolog 
 sly-u.5   101260275   COX assembly mitochondrial protein 1 
 osa-u.5   107276847   uncharacterized LOC107276847 
 zma-u.5   100383795   uncharacterized LOC100383795 
 bra-r.6   103834199   COX assembly mitochondrial protein 2 homolog 
 vvi-u.5   100245392   uncharacterized LOC100245392 
 ppo-u.5   18098350   uncharacterized LOC18098350 
 mtr-u.5   11406724   COX assembly mitochondrial protein 2 homolog 
 tae-r.2   123185653   COX assembly mitochondrial protein 2 homolog 
 tae-r.2   123185512   COX assembly mitochondrial protein 2 homolog 
 tae-r.2   123053757   COX assembly mitochondrial protein 2 homolog 
 hvu-r.1   123430461   COX assembly mitochondrial protein 2 homolog 
 hvu-r.1   123430319   COX assembly mitochondrial protein 2 homolog 
 ghi-r.1   121203451   COX assembly mitochondrial protein 2 homolog 
 ghi-r.1   107928895   COX assembly mitochondrial protein 2 homolog 
 ghi-r.1   107930412   COX assembly mitochondrial protein 2 homolog 
 bna-r.1   125591871   COX assembly mitochondrial protein 2 homolog 
 bna-r.1   106421030   COX assembly mitochondrial protein 2 homolog 
 sbi-r.1   8064294   COX assembly mitochondrial protein 2 homolog 
 sbi-r.1   8080353   COX assembly mitochondrial protein 2 homolog 
 sot-r.1   102580625   COX assembly mitochondrial protein 1 
 cit-r.1   102622931   uncharacterized LOC102622931 
 bdi-r.1   100828147   COX assembly mitochondrial protein 2 homolog 
 nta-r.1   107806590   COX assembly mitochondrial protein 1 
 nta-r.1   107806589   uncharacterized LOC107806589 

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Top 50 coexpressed genes to CHLRE_16g682587v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_16g682587v5 (cre-r.1 coexpression data)

CoexMap"5724481"


creCHLRE_16g682587v5 | Entrez gene ID : 5724481      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 1 1 1 1 1 3 2 3 2 2 1 1 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_001698874.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo 1,  nucl 1,  cyto 1,  plas 1,  cysk_nucl 1,  cyto_plas 1  (predict for XP_001698874.1)
Subcellular
localization
TargetP
other 7  (predict for XP_001698874.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_16g682587v5
ath-u.5
for
AT4G21192
gma-u.5
for
100789163
gma-u.5
for
100785247
sly-u.5
for
101260275
osa-u.5
for
107276847
zma-u.5
for
100383795
bra-r.6
for
103834199
vvi-u.5
for
100245392
ppo-u.5
for
18098350
mtr-u.5
for
11406724
tae-r.2
for
123185653
tae-r.2
for
123185512
tae-r.2
for
123053757
hvu-r.1
for
123430461
hvu-r.1
for
123430319
ghi-r.1
for
121203451
ghi-r.1
for
107928895
ghi-r.1
for
107930412
bna-r.1
for
125591871
bna-r.1
for
106421030
sbi-r.1
for
8064294
sbi-r.1
for
8080353
sot-r.1
for
102580625
cit-r.1
for
102622931
bdi-r.1
for
100828147
nta-r.1
for
107806590
nta-r.1
for
107806589


Ortholog ID: 5439
Species cre ath gma gma sly osa zma bra vvi ppo mtr tae tae tae hvu hvu ghi ghi ghi bna bna bna sbi sbi sot cit bdi nta nta
Symbol CHLRE_16g682587v5 AT4G21192 LOC100789163 LOC100785247 LOC101260275 LOC107276847 LOC100383795 LOC103834199 LOC100245392 LOC18098350 LOC11406724 LOC123185512 LOC123053757 LOC123045557 LOC123430461 LOC123430319 LOC107928895 LOC107930412 LOC107936957 LOC125591871 LOC106421030 LOC106420917 LOC8064294 LOC8080353 LOC102580625 LOC102622931 LOC100828147 LOC107806590 LOC107806589
Function* uncharacterized protein Cytochrome c oxidase biogenesis protein Cmc1-like protein COX assembly mitochondrial protein 2 homolog COX assembly mitochondrial protein 2 homolog COX assembly mitochondrial protein 1 uncharacterized LOC107276847 uncharacterized LOC100383795 COX assembly mitochondrial protein 2 homolog uncharacterized LOC100245392 uncharacterized LOC18098350 COX assembly mitochondrial protein 2 homolog COX assembly mitochondrial protein 2 homolog COX assembly mitochondrial protein 2 homolog COX assembly mitochondrial protein 2 homolog COX assembly mitochondrial protein 2 homolog COX assembly mitochondrial protein 2 homolog COX assembly mitochondrial protein 2 homolog COX assembly mitochondrial protein 2 homolog COX assembly mitochondrial protein 2 homolog COX assembly mitochondrial protein 2 homolog COX assembly mitochondrial protein 2 homolog COX assembly mitochondrial protein 2 homolog COX assembly mitochondrial protein 2 homolog COX assembly mitochondrial protein 2 homolog COX assembly mitochondrial protein 1 uncharacterized LOC102622931 COX assembly mitochondrial protein 2 homolog COX assembly mitochondrial protein 1 uncharacterized LOC107806589
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 6
cre00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
ath04144 Endocytosis 2
ath03050 Proteasome 2
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
gma00190 Oxidative phosphorylation 2
gma03050 Proteasome 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
sly00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 4
osa00510 N-Glycan biosynthesis 2
osa00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00750 Vitamin B6 metabolism 6
tae01240 Biosynthesis of cofactors 6
tae00290 Valine, leucine and isoleucine biosynthesis 2
tae00650 Butanoate metabolism 2
tae00660 C5-Branched dibasic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 5
tae02010 ABC transporters 3
tae00750 Vitamin B6 metabolism 3
tae00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 2
bna03018 RNA degradation 2
bna00270 Cysteine and methionine metabolism 2
bna04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 4
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 4
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 2
sot00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5724481 5008151 100789163 100785247 101260275 107276847 100383795 103834199 100245392 18098350 11406724 123185512 123053757 123045557 123430461 123430319 107928895 107930412 107936957 125591871 106421030 106420917 8064294 8080353 102580625 102622931 100828147 107806590 107806589
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