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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_16g674890v5   uncharacterized protein 
 ath-u.5   TDR1   Integrase-type DNA-binding superfamily protein 
 sly-u.5   ERF-B4   ethylene response factor B.4 
 sly-u.5   PTI5   pathogenesis-related genes transcriptional activator PTI5 
 zma-u.5   100384725   uncharacterized LOC100384725 
 bra-r.6   103854952   ethylene-responsive transcription factor ERF104 
 bra-r.6   103828766   ethylene-responsive transcription factor ERF098 
 mtr-u.5   25484272   ethylene-responsive transcription factor ERF098 
 hvu-r.1   123411690   ethylene-responsive transcription factor 6-like 
 ghi-r.1   107956738   ethylene-responsive transcription factor ERF098 
 bna-r.1   106444393   ethylene-responsive transcription factor ERF104-like 
 sot-r.1   102585525   ethylene-responsive transcription factor 5-like 
 sot-r.1   102585187   ethylene-responsive transcription factor 5-like 
 cit-r.1   102615330   ethylene-responsive transcription factor ERF098-like 
 bdi-r.1   100825592   pathogenesis-related genes transcriptional activator PTI5 

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Top 50 coexpressed genes to CHLRE_16g674890v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_16g674890v5 (cre-r.1 coexpression data)

CoexMap"5724763"


creCHLRE_16g674890v5 | Entrez gene ID : 5724763      
Species cre ath sly zma bra mtr hvu ghi bna sot cit bdi sbi osa gma tae ppo vvi nta
Paralog 1 1 2 1 2 1 1 1 1 2 1 1 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009873 [list] [network] ethylene-activated signaling pathway  (4 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (405 genes)  IEA  
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (142 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (670 genes)  IEA  
Protein XP_042915733.1 [sequence] [blastp]
XP_042915734.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  mito 1,  pero 1  (predict for XP_042915733.1)
nucl 6,  cyto 2,  mito 1,  pero 1  (predict for XP_042915734.1)
Subcellular
localization
TargetP
other 3  (predict for XP_042915733.1)
other 3  (predict for XP_042915734.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_16g674890v5
ath-u.5
for
TDR1
sly-u.5
for
ERF-B4
sly-u.5
for
PTI5
zma-u.5
for
100384725
bra-r.6
for
103854952
bra-r.6
for
103828766
mtr-u.5
for
25484272
hvu-r.1
for
123411690
ghi-r.1
for
107956738
bna-r.1
for
106444393
sot-r.1
for
102585525
sot-r.1
for
102585187
cit-r.1
for
102615330
bdi-r.1
for
100825592


Ortholog ID: 80
Species cre gma gma sly sly osa zma bra bra vvi ppo mtr mtr hvu ghi sot cit nta
Symbol CHLRE_16g674890v5 LOC100811533 LOC100816416 PTI5 LOC101250863 LOC4327006 LOC100281172 LOC103843859 LOC103864857 LOC100258333 LOC18103101 LOC25498943 LOC25498942 LOC123403589 LOC107956738 LOC107062792 LOC102618625 LOC107793963
Function* uncharacterized protein pathogenesis-related genes transcriptional activator PTI5 ethylene-responsive transcription factor ERF105 pathogenesis-related genes transcriptional activator PTI5 ethylene response factor B.2 pathogenesis-related genes transcriptional activator PTI5 uncharacterized LOC100281172 ethylene-responsive transcription factor 1-like ethylene-responsive transcription factor ERF105 ethylene-responsive transcription factor ERF098 pathogenesis-related genes transcriptional activator PTI5 ethylene-responsive transcription factor 1 ethylene-responsive transcription factor 1 ethylene-responsive transcription factor ERF104-like ethylene-responsive transcription factor ERF098 ethylene-responsive transcription factor 5-like ethylene-responsive transcription factor ERF098-like pathogenesis-related genes transcriptional activator PTI5-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 7
gma04075 Plant hormone signal transduction 7
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00350 Tyrosine metabolism 2
sly00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 3
osa00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00480 Glutathione metabolism 5
zma00902 Monoterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
bra04075 Plant hormone signal transduction 3
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 10
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00480 Glutathione metabolism 5
ppo04141 Protein processing in endoplasmic reticulum 2
ppo04626 Plant-pathogen interaction 2
ppo00902 Monoterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00900 Terpenoid backbone biosynthesis 9
mtr04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00900 Terpenoid backbone biosynthesis 9
mtr04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00052 Galactose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 4
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00460 Cyanoamino acid metabolism 2
cit00500 Starch and sucrose metabolism 2
cit00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00909 Sesquiterpenoid and triterpenoid biosynthesis 6
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5724763 100811533 100816416 544042 101250863 4327006 100281172 103843859 103864857 100258333 18103101 25498943 25498942 123403589 107956738 107062792 102618625 107793963
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