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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_16g672041v5   uncharacterized protein 
 ath-u.5   AT3G56120   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 gma-u.5   100812740   tRNA (guanine(37)-N1)-methyltransferase 2 
 gma-u.5   100790336   tRNA (guanine(37)-N1)-methyltransferase 2 
 sly-u.5   101265822   tRNA (guanine(37)-N1)-methyltransferase 2 
 osa-u.5   9271157   tRNA (guanine(37)-N1)-methyltransferase 
 zma-u.5   100274674   tRNA (guanine(37)-N1)-methyltransferase 1 
 bra-r.6   103841517   tRNA (guanine(37)-N1)-methyltransferase 1 
 vvi-u.5   100266181   tRNA (guanine(37)-N1)-methyltransferase 2-like 
 ppo-u.5   18107635   tRNA (guanine(37)-N1)-methyltransferase 2 
 mtr-u.5   25493940   tRNA (guanine(37)-N1)-methyltransferase 2 
 tae-r.2   123137410   tRNA (guanine(37)-N1)-methyltransferase 
 tae-r.2   123144756   tRNA (guanine(37)-N1)-methyltransferase 
 tae-r.2   123127651   tRNA (guanine(37)-N1)-methyltransferase 
 hvu-r.1   123402498   tRNA (guanine(37)-N1)-methyltransferase 
 ghi-r.1   107962659   tRNA (guanine(37)-N1)-methyltransferase 1 
 ghi-r.1   107901212   tRNA (guanine(37)-N1)-methyltransferase 1 
 bna-r.1   106432261   tRNA (guanine(37)-N1)-methyltransferase 1 
 bna-r.1   106368106   tRNA (guanine(37)-N1)-methyltransferase 1 
 sbi-r.1   8056501   tRNA (guanine(37)-N1)-methyltransferase 
 sot-r.1   102602194   tRNA (guanine(37)-N1)-methyltransferase 2 
 cit-r.1   102626493   tRNA (guanine(37)-N1)-methyltransferase 2 
 bdi-r.1   100840755   tRNA (guanine(37)-N1)-methyltransferase 
 nta-r.1   107765683   tRNA (guanine(37)-N(1))-methyltransferase 2 
 nta-r.1   107790878   tRNA (guanine(37)-N(1))-methyltransferase 2 

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Top 50 coexpressed genes to CHLRE_16g672041v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_16g672041v5 (cre-r.1 coexpression data)

CoexMap"5724827"


creCHLRE_16g672041v5 | Entrez gene ID : 5724827      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 1 1 1 1 1 3 1 2 2 1 1 1 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0002939 [list] [network] tRNA N1-guanine methylation  (4 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (2907 genes)  IEA  
GO MF
Protein XP_042915728.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 1,  mito 1,  plas 1,  pero 1,  E.R._vacu 1,  mito_plas 1  (predict for XP_042915728.1)
Subcellular
localization
TargetP
chlo 5,  other 5  (predict for XP_042915728.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_16g672041v5
ath-u.5
for
AT3G56120
gma-u.5
for
100812740
gma-u.5
for
100790336
sly-u.5
for
101265822
osa-u.5
for
9271157
zma-u.5
for
100274674
bra-r.6
for
103841517
vvi-u.5
for
100266181
ppo-u.5
for
18107635
mtr-u.5
for
25493940
tae-r.2
for
123137410
tae-r.2
for
123144756
tae-r.2
for
123127651
hvu-r.1
for
123402498
ghi-r.1
for
107962659
ghi-r.1
for
107901212
bna-r.1
for
106432261
bna-r.1
for
106368106
sbi-r.1
for
8056501
sot-r.1
for
102602194
cit-r.1
for
102626493
bdi-r.1
for
100840755
nta-r.1
for
107765683
nta-r.1
for
107790878


Ortholog ID: 10153
Species cre ath gma gma sly osa zma bra vvi ppo mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_16g672041v5 AT3G56120 LOC100812740 LOC100790336 LOC101265822 LOC9271157 LOC100274674 LOC103841517 LOC100266181 LOC18107635 LOC25493940 LOC123137410 LOC123144756 LOC123127651 LOC123402498 LOC107962659 LOC107901212 LOC106432261 LOC106368106 LOC8056501 LOC102602194 LOC102626493 LOC100840755 LOC107765683 LOC107790878
Function* uncharacterized protein S-adenosyl-L-methionine-dependent methyltransferases superfamily protein tRNA (guanine(37)-N1)-methyltransferase 2 tRNA (guanine(37)-N1)-methyltransferase 2 tRNA (guanine(37)-N1)-methyltransferase 2 tRNA (guanine(37)-N1)-methyltransferase tRNA (guanine(37)-N1)-methyltransferase 1 tRNA (guanine(37)-N1)-methyltransferase 1 tRNA (guanine(37)-N1)-methyltransferase 2-like tRNA (guanine(37)-N1)-methyltransferase 2 tRNA (guanine(37)-N1)-methyltransferase 2 tRNA (guanine(37)-N1)-methyltransferase tRNA (guanine(37)-N1)-methyltransferase tRNA (guanine(37)-N1)-methyltransferase tRNA (guanine(37)-N1)-methyltransferase tRNA (guanine(37)-N1)-methyltransferase 1 tRNA (guanine(37)-N1)-methyltransferase 1 tRNA (guanine(37)-N1)-methyltransferase 1 tRNA (guanine(37)-N1)-methyltransferase 1 tRNA (guanine(37)-N1)-methyltransferase tRNA (guanine(37)-N1)-methyltransferase 2 tRNA (guanine(37)-N1)-methyltransferase 2 tRNA (guanine(37)-N1)-methyltransferase tRNA (guanine(37)-N(1))-methyltransferase 2 tRNA (guanine(37)-N(1))-methyltransferase 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
cre03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 3
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 3
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03013 Nucleocytoplasmic transport 3
gma03015 mRNA surveillance pathway 3
gma03082 ATP-dependent chromatin remodeling 2
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03020 RNA polymerase 2
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 4
zma00970 Aminoacyl-tRNA biosynthesis 2
zma03082 ATP-dependent chromatin remodeling 2
zma03018 RNA degradation 2
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 4
bra03013 Nucleocytoplasmic transport 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 5
tae03013 Nucleocytoplasmic transport 4
tae03040 Spliceosome 4
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03040 Spliceosome 2
ghi03015 mRNA surveillance pathway 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03040 Spliceosome 4
ghi03015 mRNA surveillance pathway 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 5
bna03013 Nucleocytoplasmic transport 2
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 5
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5724827 824778 100812740 100790336 101265822 9271157 100274674 103841517 100266181 18107635 25493940 123137410 123144756 123127651 123402498 107962659 107901212 106432261 106368106 8056501 102602194 102626493 100840755 107765683 107790878
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