ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cre-r.1	CHLRE_16g690750v5	uncharacterized protein
cre-r.1	CHLRE_06g263650v5	uncharacterized protein
cre-r.1	CHLRE_16g689950v5	uncharacterized protein
ath-u.5	AT3G03680	C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
ath-u.5	QKY	C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
ath-u.5	AT1G51570	Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein
gma-u.5	100814611	FT-interacting protein 1
gma-u.5	100815669	FT-interacting protein 3
sly-u.5	101263238	multiple C2 domain and transmembrane region protein 14
sly-u.5	101262047	FT-interacting protein 1
sly-u.5	101261289	multiple C2 domain and transmembrane region protein 6-like
osa-u.5	4343239	FT-interacting protein 3
osa-u.5	4331135	FT-interacting protein 3
osa-u.5	9270377	multiple C2 domain and transmembrane region protein 8
zma-u.5	100501234	uncharacterized LOC100501234
zma-u.5	100273873	uncharacterized LOC100273873
bra-r.6	103830123	FT-interacting protein 3
bra-r.6	103845885	FT-interacting protein 7
bra-r.6	103846615	FT-interacting protein 3
vvi-u.5	100264197	multiple C2 domain and transmembrane region protein 6
ppo-u.5	18104140	FT-interacting protein 7
ppo-u.5	18104408	FT-interacting protein 7
ppo-u.5	18099871	FT-interacting protein 3
mtr-u.5	25495855	protein QUIRKY
mtr-u.5	25492619	FT-interacting protein 3
mtr-u.5	11420716	FT-interacting protein 1
tae-r.2	123191233	FT-interacting protein 4
tae-r.2	123191119	FT-interacting protein 3
tae-r.2	123161044	protein QUIRKY
hvu-r.1	123426986	FT-interacting protein 1-like
hvu-r.1	123413006	protein QUIRKY
ghi-r.1	107913462	FT-interacting protein 7
ghi-r.1	107914672	FT-interacting protein 3
ghi-r.1	107922722	FT-interacting protein 3
bna-r.1	125592983	FT-interacting protein 1
sbi-r.1	110436086	FT-interacting protein 1-like
sbi-r.1	110430780	FT-interacting protein 1-like
sot-r.1	102594014	protein QUIRKY-like
sot-r.1	102604455	protein QUIRKY-like
sot-r.1	102594343	protein QUIRKY-like
cit-r.1	102617844	FT-interacting protein 7-like
cit-r.1	102615790	FT-interacting protein 3
cit-r.1	102631273	FT-interacting protein 1
bdi-r.1	100833034	FT-interacting protein 1
bdi-r.1	100822081	FT-interacting protein 1
bdi-r.1	100824776	FT-interacting protein 1
nta-r.1	107802471	protein QUIRKY-like
nta-r.1	107793356	multiple C2 domain and transmembrane region protein 16-like

Top 50 coexpressed genes to CHLRE_16g690750v5 (cre-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to CHLRE_16g690750v5 (cre-r.1 coexpression data)

CoexMap"5724836"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005783 [list] [network] endoplasmic reticulum

(454 genes)

IEA

GO MF

GO:0008289 [list] [network] lipid binding

(85 genes)

IEA

Protein

XP_042915369.1 [sequence] [blastp]
XP_042915370.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, mito 2, nucl 1	(predict for XP_042915369.1)
chlo 6, mito 2, nucl 1	(predict for XP_042915370.1)

Subcellular
localization
TargetP

mito 5, other 4	(predict for XP_042915369.1)
other 5, mito 4	(predict for XP_042915370.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_16g690750v5	cre-r.1 for CHLRE_06g263650v5	cre-r.1 for CHLRE_16g689950v5	ath-u.5 for AT3G03680	ath-u.5 for QKY	ath-u.5 for AT1G51570	gma-u.5 for 100814611	gma-u.5 for 100815669	sly-u.5 for 101263238	sly-u.5 for 101262047	sly-u.5 for 101261289	osa-u.5 for 4343239	osa-u.5 for 4331135	osa-u.5 for 9270377	zma-u.5 for 100501234	zma-u.5 for 100273873	bra-r.6 for 103830123	bra-r.6 for 103845885	bra-r.6 for 103846615	vvi-u.5 for 100264197	ppo-u.5 for 18104140	ppo-u.5 for 18104408	ppo-u.5 for 18099871	mtr-u.5 for 25495855	mtr-u.5 for 25492619	mtr-u.5 for 11420716	tae-r.2 for 123191233	tae-r.2 for 123191119	tae-r.2 for 123161044	hvu-r.1 for 123426986	hvu-r.1 for 123413006	ghi-r.1 for 107913462	ghi-r.1 for 107914672	ghi-r.1 for 107922722	bna-r.1 for 125592983	sbi-r.1 for 110436086	sbi-r.1 for 110430780	sot-r.1 for 102594014	sot-r.1 for 102604455	sot-r.1 for 102594343	cit-r.1 for 102617844	cit-r.1 for 102615790	cit-r.1 for 102631273	bdi-r.1 for 100833034	bdi-r.1 for 100822081	bdi-r.1 for 100824776	nta-r.1 for 107802471	nta-r.1 for 107793356

Ortholog

Ortholog ID: 49

Species

cre

ath

gma

sly

osa

zma

bra

vvi

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

QKY

Function^*

uncharacterized protein

C2 calcium/lipid-binding plant phosphoribosyltransferase family protein

protein QUIRKY

FT-interacting protein 3

multiple C2 domain and transmembrane region protein 7

FT-interacting protein 3-like

FT-interacting protein 1

multiple C2 domain and transmembrane region protein 14

phosphoribosylanthranilate transferase

C2 calcium/lipid-binding plant phosphoribosyltransferase family protein

FT-interacting protein 3

FT-interacting protein 7

FT-interacting protein 7-like

multiple C2 domain and transmembrane region protein 6

protein QUIRKY

multiple C2 domain and transmembrane region protein 7

FT-interacting protein 1

protein VARIATION IN COMPOUND TRIGGERED ROOT growth response

FT-interacting protein 7

protein QUIRKY

FT-interacting protein 1

FT-interacting protein 7

FT-interacting protein 3

FT-interacting protein 7

FT-interacting protein 3

FT-interacting protein 1

protein QUIRKY

protein QUIRKY-like

protein QUIRKY

FT-interacting protein 7-like

FT-interacting protein 7

FT-interacting protein 1

FT-interacting protein 1-like

multiple C2 domain and transmembrane region protein 6-like

multiple C2 domain and transmembrane region protein 16-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00130	Ubiquinone and other terpenoid-quinone biosynthesis	3
cre01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04136	Autophagy - other	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	3
tae04814	Motor proteins	3
tae00220	Arginine biosynthesis	2
tae00250	Alanine, aspartate and glutamate metabolism	2
tae00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00010	Glycolysis / Gluconeogenesis	2
ghi01200	Carbon metabolism	2
ghi01230	Biosynthesis of amino acids	2
ghi03018	RNA degradation	2
ghi04820	Cytoskeleton in muscle cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	4

Expression

Expression pattern

Entrez Gene ID^*

5724836

5721988

5724798

843811

834858

100783882

101260588

101252905

101249303

4341529

4333597

100285739

100381735

103633176

103853319

103840845

103862831

100264197

100262158

100264973

11420716

11425549

25495818

123121928

123413006

123412789

123452986

107922722

107936272

121202944

106426383

8064299

8082451

102594343

102580755

102594579

102618128

102618624

100833034

100822081

100828974

107807244

107815700

107815200

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Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	3	3	2	3	3	2	3	1	3	3	3	2	3	1	2	3	3	3	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_16g690750v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_16g690750v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**