ATTED-II : GeneCoexpression result

Species	Gene	Description
cre-r.1	CHLRE_03g211857v5	uncharacterized protein
cre-r.1	CHLRE_03g212417v5	uncharacterized protein
cre-r.1	CHLRE_03g211969v5	uncharacterized protein
ath-u.5	RIN13	RPM1 interacting protein 13
gma-u.5	102668707	uncharacterized LOC102668707
sly-u.5	101251758	RPM1 interacting protein 13
sly-u.5	101254939	uncharacterized LOC101254939
osa-u.5	4348841	RPM1 interacting protein 13
osa-u.5	4331574	uncharacterized LOC4331574
zma-u.5	103631697	RPM1 interacting protein 13
zma-u.5	100277964	RPM1 interacting protein 13
zma-u.5	100277494	uncharacterized LOC100277494
bra-r.6	103838001	uncharacterized LOC103838001
vvi-u.5	100258397	RPM1 interacting protein 13
ppo-u.5	7461482	RPM1 interacting protein 13
ppo-u.5	7493465	RPM1 interacting protein 13
mtr-u.5	11443485	uncharacterized LOC11443485
mtr-u.5	11428227	GATA zinc finger domain-containing protein 14
mtr-u.5	25484195	uncharacterized LOC25484195
tae-r.2	123044953	uncharacterized LOC123044953
hvu-r.1	123410946	uncharacterized LOC123410946
ghi-r.1	107924467	uncharacterized LOC107924467
ghi-r.1	107924419	uncharacterized LOC107924419
ghi-r.1	107923152	uncharacterized LOC107923152
bna-r.1	106368838	uncharacterized LOC106368838
bna-r.1	106357572	CREB-regulated transcription coactivator 1
sbi-r.1	8059261	uncharacterized LOC8059261
sot-r.1	102591225	uncharacterized LOC102591225
sot-r.1	102588818	uncharacterized LOC102588818
cit-r.1	102608244	RPM1 interacting protein 13
cit-r.1	102629006	RPM1 interacting protein 13-like
bdi-r.1	104584192	uncharacterized LOC104584192
bdi-r.1	104581883	uncharacterized LOC104581883
nta-r.1	107780091	uncharacterized LOC107780091

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_042926712.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 8, cyto 1, cyto_pero 1

(predict for XP_042926712.1)

Subcellular
localization
TargetP

chlo 7, other 5

(predict for XP_042926712.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_03g211857v5	cre-r.1 for CHLRE_03g212417v5	cre-r.1 for CHLRE_03g211969v5	ath-u.5 for RIN13	gma-u.5 for 102668707	sly-u.5 for 101251758	sly-u.5 for 101254939	osa-u.5 for 4348841	osa-u.5 for 4331574	zma-u.5 for 103631697	zma-u.5 for 100277964	zma-u.5 for 100277494	bra-r.6 for 103838001	vvi-u.5 for 100258397	ppo-u.5 for 7461482	ppo-u.5 for 7493465	mtr-u.5 for 11443485	mtr-u.5 for 11428227	mtr-u.5 for 25484195	tae-r.2 for 123044953	hvu-r.1 for 123410946	ghi-r.1 for 107924467	ghi-r.1 for 107924419	ghi-r.1 for 107923152	bna-r.1 for 106368838	bna-r.1 for 106357572	sbi-r.1 for 8059261	sot-r.1 for 102591225	sot-r.1 for 102588818	cit-r.1 for 102608244	cit-r.1 for 102629006	bdi-r.1 for 104584192	bdi-r.1 for 104581883	nta-r.1 for 107780091

Ortholog

Ortholog ID: 790

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

hvu

ghi

sbi

sot

cit

bdi

nta

Symbol

RIN13

Function^*

uncharacterized protein

RPM1 interacting protein 13

uncharacterized protein

uncharacterized LOC102665987

RPM1 interacting protein 13

uncharacterized LOC101254939

RPM1 interacting protein 13

uncharacterized LOC4331574

RPM1 interacting protein 13

uncharacterized LOC100277494

uncharacterized LOC103838001

RPM1 interacting protein 13

uncharacterized LOC11443485

GATA zinc finger domain-containing protein 14

uncharacterized LOC25489793

uncharacterized LOC123410946

uncharacterized LOC123430480

uncharacterized LOC107961164

uncharacterized LOC107904545

uncharacterized LOC8059261

uncharacterized LOC102591225

uncharacterized LOC102588818

RPM1 interacting protein 13

RPM1 interacting protein 13-like

uncharacterized LOC104584192

uncharacterized LOC100828814

uncharacterized LOC107791845

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00510	N-Glycan biosynthesis	4
gma00513	Various types of N-glycan biosynthesis	4
gma04141	Protein processing in endoplasmic reticulum	4
gma00240	Pyrimidine metabolism	2
gma00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03440	Homologous recombination	2
zma03460	Fanconi anemia pathway	2
zma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04712	Circadian rhythm - plant	2
bra03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00260	Glycine, serine and threonine metabolism	4
ppo01200	Carbon metabolism	4
ppo00630	Glyoxylate and dicarboxylate metabolism	3
ppo00670	One carbon pool by folate	3
ppo00785	Lipoic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	5
mtr00230	Purine metabolism	2
mtr01232	Nucleotide metabolism	2
mtr00730	Thiamine metabolism	2
mtr00740	Riboflavin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	3
ghi03015	mRNA surveillance pathway	3
ghi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03018	RNA degradation	2
sot04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	4
cit03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00220	Arginine biosynthesis	2
bdi00250	Alanine, aspartate and glutamate metabolism	2
bdi00630	Glyoxylate and dicarboxylate metabolism	2
bdi00910	Nitrogen metabolism	2
bdi01230	Biosynthesis of amino acids	2

Expression

Expression pattern

Entrez Gene ID^*

5725015

5724966

816550

828987

102665987

101251758

101254939

4348841

4331574

103631697

100277964

100277494

103838001

100258397

7461482

7493465

11443485

11428227

25489793

123410946

123430480

107961164

107904545

8059261

102591225

102588818

102608244

102629006

104584192

100828814

107791845

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to CHLRE_03g211857v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_03g211857v5 (cre-r.1 coexpression data)


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	3	1	1	2	2	3	1	1	2	3	1	1	3	2	1	2	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_03g211857v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_03g211857v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**