ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cre-r.1	CHLRE_11g467767v5	uncharacterized protein
ath-u.5	AT3G03100	NADH:ubiquinone oxidoreductase, 17.2kDa subunit
gma-u.5	100500270	uncharacterized LOC100500270
gma-u.5	100500489	uncharacterized LOC100500489
sly-u.5	101267099	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
osa-u.5	4349513	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
zma-u.5	100192845	putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
zma-u.5	100285721	NADH-ubiquinone oxidoreductase subunit B17.2
bra-r.6	103855131	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
bra-r.6	103844029	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
vvi-u.5	100266690	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
ppo-u.5	18108303	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
mtr-u.5	25500192	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
tae-r.2	123126573	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
tae-r.2	123050860	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
hvu-r.1	123436971	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
ghi-r.1	121206147	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
ghi-r.1	107891511	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
bna-r.1	125587547	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
bna-r.1	106435953	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
bna-r.1	106435805	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
sbi-r.1	110436296	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
sot-r.1	102605402	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
cit-r.1	102610487	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
cit-r.1	127900948	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
bdi-r.1	100843484	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
nta-r.1	107791144	putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
nta-r.1	107789341	putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

Top 50 coexpressed genes to CHLRE_11g467767v5 (cre-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to CHLRE_11g467767v5 (cre-r.1 coexpression data)

CoexMap"5725071"

[Cytoscape]

Annotation

functional annotation

KEGG

cre00190 [list] [network] Oxidative phosphorylation (84 genes)

GO BP

GO:0032981 [list] [network] mitochondrial respiratory chain complex I assembly	(12 genes)	IEA
GO:0006979 [list] [network] response to oxidative stress	(58 genes)	IEA

GO CC

GO:0016020 [list] [network] membrane

(1543 genes)

IEA

GO MF

Protein

XP_001699522.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, nucl 4

(predict for XP_001699522.1)

Subcellular
localization
TargetP

other 3

(predict for XP_001699522.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_11g467767v5	ath-u.5 for AT3G03100	gma-u.5 for 100500270	gma-u.5 for 100500489	sly-u.5 for 101267099	osa-u.5 for 4349513	zma-u.5 for 100192845	zma-u.5 for 100285721	bra-r.6 for 103855131	bra-r.6 for 103844029	vvi-u.5 for 100266690	ppo-u.5 for 18108303	mtr-u.5 for 25500192	tae-r.2 for 123126573	tae-r.2 for 123050860	hvu-r.1 for 123436971	ghi-r.1 for 121206147	ghi-r.1 for 107891511	bna-r.1 for 125587547	bna-r.1 for 106435953	bna-r.1 for 106435805	sbi-r.1 for 110436296	sot-r.1 for 102605402	cit-r.1 for 102610487	cit-r.1 for 127900948	bdi-r.1 for 100843484	nta-r.1 for 107791144	nta-r.1 for 107789341

Ortholog

Ortholog ID: 8009

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

Function^*

uncharacterized protein

NADH:ubiquinone oxidoreductase, 17.2kDa subunit

uncharacterized LOC100500270

uncharacterized LOC100500489

probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

NADH-ubiquinone oxidoreductase subunit B17.2

probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00190	Oxidative phosphorylation	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	9
ath04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	11
gma03013	Nucleocytoplasmic transport	2
gma04120	Ubiquitin mediated proteolysis	2
gma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	8
osa04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	6
bra03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00190	Oxidative phosphorylation	5
vvi03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00190	Oxidative phosphorylation	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	12
ghi03060	Protein export	2
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	12
ghi03060	Protein export	2
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	8
bna00620	Pyruvate metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	8
bna00620	Pyruvate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	8
bna00620	Pyruvate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	9
sbi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	5
sot03050	Proteasome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	4
cit04141	Protein processing in endoplasmic reticulum	3
cit03060	Protein export	2
cit00510	N-Glycan biosynthesis	2
cit00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	11
nta03010	Ribosome	3
nta04145	Phagosome	3
nta03050	Proteasome	2
nta00750	Vitamin B6 metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	12
nta04145	Phagosome	5

Expression

Expression pattern

Entrez Gene ID^*

5725071

821104

100500270

100500489

101267099

4349513

100192845

100285721

103855131

103844029

100266690

18108303

25500192

123126573

123050860

123436971

121206147

107891511

125587547

106435953

106432850

110436296

102605402

102610487

127900948

100843484

107791144

107789341

The preparation time of this page was 0.3 [sec].


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	1	2	1	1	2	2	1	1	1	2	1	2	3	1	1	2	1	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_11g467767v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_11g467767v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**