ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cre-r.1	CHLRE_02g111900v5	uncharacterized protein
ath-u.5	AT1G22480	Cupredoxin superfamily protein
ath-u.5	AT1G72230	Cupredoxin superfamily protein
ath-u.5	BCB	blue-copper-binding protein
gma-u.5	100806172	cucumber peeling cupredoxin
gma-u.5	100803164	uclacyanin-3
sly-u.5	101266215	blue copper protein
sly-u.5	101252269	cucumber peeling cupredoxin-like
osa-u.5	9266186	mavicyanin
osa-u.5	4330178	blue copper protein
osa-u.5	4345861	blue copper protein
zma-u.5	100191824	blue copper protein
zma-u.5	100382230	Cupredoxin superfamily protein
zma-u.5	100286319	blue copper protein
bra-r.6	103867918	mavicyanin
bra-r.6	103866157	uclacyanin-2
bra-r.6	103847807	blue copper protein
vvi-u.5	100265072	uclacyanin-3
vvi-u.5	100268054	blue copper protein
vvi-u.5	100242337	blue copper protein
ppo-u.5	7461797	blue copper protein
ppo-u.5	7470086	cucumber peeling cupredoxin
ppo-u.5	18105079	uclacyanin-3
mtr-u.5	11425589	blue copper protein
mtr-u.5	11429653	blue copper protein
mtr-u.5	11419969	blue copper protein
tae-r.2	123157494	blue copper protein
hvu-r.1	123396882	blue copper protein-like
hvu-r.1	123395721	blue copper protein-like
hvu-r.1	123409270	blue copper protein-like
ghi-r.1	107942687	stellacyanin
ghi-r.1	107942465	uncharacterized LOC107942465
bna-r.1	106395278	uclacyanin-2-like
bna-r.1	106395427	uclacyanin-3-like
sbi-r.1	8083261	mavicyanin
sbi-r.1	8076244	uclacyanin-3
sot-r.1	102604557	mavicyanin-like
sot-r.1	102603718	uclacyanin-3-like
sot-r.1	102600778	cucumber peeling cupredoxin-like
cit-r.1	102613370	umecyanin-like
cit-r.1	102613661	uclacyanin 1
cit-r.1	102618126	blue copper protein
bdi-r.1	100842755	mavicyanin
bdi-r.1	100830982	blue copper protein
nta-r.1	107788849	basic blue protein-like
nta-r.1	107829449	uncharacterized LOC107829449
nta-r.1	107825924	cucumber peeling cupredoxin-like

Top 50 coexpressed genes to CHLRE_02g111900v5 (cre-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to CHLRE_02g111900v5 (cre-r.1 coexpression data)

CoexMap"5725242"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_001699918.1 [sequence] [blastp]
XP_042927534.1 [sequence] [blastp]

Subcellular
localization
wolf

vacu 4, extr 4, chlo 1	(predict for XP_001699918.1)
vacu 4, extr 4, chlo 1	(predict for XP_042927534.1)

Subcellular
localization
TargetP

scret 9	(predict for XP_001699918.1)
scret 9	(predict for XP_042927534.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_02g111900v5	ath-u.5 for AT1G22480	ath-u.5 for AT1G72230	ath-u.5 for BCB	gma-u.5 for 100806172	gma-u.5 for 100803164	sly-u.5 for 101266215	sly-u.5 for 101252269	osa-u.5 for 9266186	osa-u.5 for 4330178	osa-u.5 for 4345861	zma-u.5 for 100191824	zma-u.5 for 100382230	zma-u.5 for 100286319	bra-r.6 for 103867918	bra-r.6 for 103866157	bra-r.6 for 103847807	vvi-u.5 for 100265072	vvi-u.5 for 100268054	vvi-u.5 for 100242337	ppo-u.5 for 7461797	ppo-u.5 for 7470086	ppo-u.5 for 18105079	mtr-u.5 for 11425589	mtr-u.5 for 11429653	mtr-u.5 for 11419969	tae-r.2 for 123157494	hvu-r.1 for 123396882	hvu-r.1 for 123395721	hvu-r.1 for 123409270	ghi-r.1 for 107942687	ghi-r.1 for 107942465	bna-r.1 for 106395278	bna-r.1 for 106395427	sbi-r.1 for 8083261	sbi-r.1 for 8076244	sot-r.1 for 102604557	sot-r.1 for 102603718	sot-r.1 for 102600778	cit-r.1 for 102613370	cit-r.1 for 102613661	cit-r.1 for 102618126	bdi-r.1 for 100842755	bdi-r.1 for 100830982	nta-r.1 for 107788849	nta-r.1 for 107829449	nta-r.1 for 107825924

Ortholog

Ortholog ID: 186

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

Function^*

uncharacterized protein

Cupredoxin superfamily protein

cucumber peeling cupredoxin

uclacyanin-3

blue copper protein

dicyanin

early nodulin-like protein 9

mavicyanin

blue copper protein

basic blue protein

Cupredoxin superfamily protein

uncharacterized LOC541713

uncharacterized LOC100283414

mavicyanin

uclacyanin-2

umecyanin

uclacyanin-3

blue copper protein

cucumber peeling cupredoxin

umecyanin

blue copper protein

mavicyanin

blue copper protein

blue copper protein-like

blue copper protein

umecyanin

blue copper protein

uclacyanin-3-like

blue copper protein

basic blue protein-like

mavicyanin-like

cucumber peeling cupredoxin-like

blue copper protein

mavicyanin

blue copper protein

cucumber peeling cupredoxin-like

mavicyanin

blue copper protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00940	Phenylpropanoid biosynthesis	11
gma00130	Ubiquinone and other terpenoid-quinone biosynthesis	8
gma00941	Flavonoid biosynthesis	5
gma00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	5
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	2
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00520	Amino sugar and nucleotide sugar metabolism	2
sly04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00940	Phenylpropanoid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04016	MAPK signaling pathway - plant	4
osa04626	Plant-pathogen interaction	3
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04016	MAPK signaling pathway - plant	2
osa04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	2
bra00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00073	Cutin, suberine and wax biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04016	MAPK signaling pathway - plant	2
ppo04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
ppo01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00052	Galactose metabolism	2
hvu00500	Starch and sucrose metabolism	2
hvu00520	Amino sugar and nucleotide sugar metabolism	2
hvu01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	4
ghi04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00941	Flavonoid biosynthesis	4
sbi04712	Circadian rhythm - plant	3
sbi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot02010	ABC transporters	2
sot04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00941	Flavonoid biosynthesis	4
bdi00670	One carbon pool by folate	3
bdi01230	Biosynthesis of amino acids	2
bdi01240	Biosynthesis of cofactors	2
bdi00944	Flavone and flavonol biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00062	Fatty acid elongation	2
bdi04626	Plant-pathogen interaction	2
bdi00940	Phenylpropanoid biosynthesis	2
bdi00941	Flavonoid biosynthesis	2
bdi00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	2
nta00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00940	Phenylpropanoid biosynthesis	4
nta00941	Flavonoid biosynthesis	4
nta00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	4
nta00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
nta00999	Biosynthesis of various plant secondary metabolites	3

Expression

Expression pattern

Entrez Gene ID^*

5725242

843555

100806172

100789844

101266215

543645

104648249

9266186

4345861

4345860

100382230

541713

100283414

103867918

103866157

103845697

100265072

100268054

100243780

7470086

7485466

7470088

11425589

11429653

123116316

123134504

123396882

123409270

123402589

121230337

121225221

121225219

106395427

106417681

106454792

8083259

110436893

102604557

102600778

102600455

102618126

100842755

100830982

100843685

107825924

107814170

107788304

The preparation time of this page was 0.3 [sec].


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	3	2	2	3	3	3	3	3	3	1	3	2	2	2	3	3	2	3

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_02g111900v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_02g111900v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**