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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_02g101950v5   uncharacterized protein 
 ath-u.5   AT2G28450   zinc finger (CCCH-type) family protein 
 gma-u.5   100816103   zinc finger CCCH domain-containing protein 24 
 gma-u.5   100777601   zinc finger CCCH domain-containing protein 24 
 sly-u.5   101256158   zinc finger CCCH domain-containing protein 24 
 osa-u.5   9271204   zinc finger CCCH domain-containing protein 24 
 zma-u.5   103646885   zinc finger CCCH domain-containing protein 24 
 zma-u.5   103641439   zinc finger CCCH domain-containing protein 24 
 bra-r.6   103829742   zinc finger CCCH domain-containing protein 24 
 vvi-u.5   100262197   zinc finger CCCH domain-containing protein 24 
 ppo-u.5   7491136   zinc finger CCCH domain-containing protein 24 
 mtr-u.5   11405605   zinc finger CCCH domain-containing protein 24 
 tae-r.2   123043256   zinc finger CCCH domain-containing protein 24 
 tae-r.2   123051124   zinc finger CCCH domain-containing protein 24 
 tae-r.2   123187076   zinc finger CCCH domain-containing protein 24 
 hvu-r.1   123424415   zinc finger CCCH domain-containing protein 24 
 ghi-r.1   107963867   zinc finger CCCH domain-containing protein 24 
 ghi-r.1   107943085   zinc finger CCCH domain-containing protein 24 
 bna-r.1   125585447   zinc finger CCCH domain-containing protein 24-like 
 bna-r.1   106352589   zinc finger CCCH domain-containing protein 24 
 sbi-r.1   8080240   zinc finger CCCH domain-containing protein 24 
 sot-r.1   102606148   zinc finger CCCH domain-containing protein 24 
 cit-r.1   102606993   zinc finger CCCH domain-containing protein 24 
 bdi-r.1   100838257   zinc finger CCCH domain-containing protein 24 
 nta-r.1   107783511   zinc finger CCCH domain-containing protein 24 
 nta-r.1   107776384   zinc finger CCCH domain-containing protein 24-like 

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Top 50 coexpressed genes to CHLRE_02g101950v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_02g101950v5 (cre-r.1 coexpression data)

CoexMap"5725352"


creCHLRE_02g101950v5 | Entrez gene ID : 5725352    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 2 1 1 1 1 3 1 2 2 1 1 1 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006396 [list] [network] RNA processing  (507 genes)  IEA  
GO CC
GO MF
GO:0008173 [list] [network] RNA methyltransferase activity  (41 genes)  IEA  
Protein XP_042927370.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 1,  vacu 1,  E.R. 1,  cyto_mito 1,  E.R._vacu 1,  mito_plas 1  (predict for XP_042927370.1)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for XP_042927370.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_02g101950v5
ath-u.5
for
AT2G28450
gma-u.5
for
100816103
gma-u.5
for
100777601
sly-u.5
for
101256158
osa-u.5
for
9271204
zma-u.5
for
103646885
zma-u.5
for
103641439
bra-r.6
for
103829742
vvi-u.5
for
100262197
ppo-u.5
for
7491136
mtr-u.5
for
11405605
tae-r.2
for
123043256
tae-r.2
for
123051124
tae-r.2
for
123187076
hvu-r.1
for
123424415
ghi-r.1
for
107963867
ghi-r.1
for
107943085
bna-r.1
for
125585447
bna-r.1
for
106352589
sbi-r.1
for
8080240
sot-r.1
for
102606148
cit-r.1
for
102606993
bdi-r.1
for
100838257
nta-r.1
for
107783511
nta-r.1
for
107776384


Ortholog ID: 9406
Species cre ath gma gma sly osa zma zma bra vvi ppo mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_02g101950v5 AT2G28450 LOC100816103 LOC100777601 LOC101256158 LOC9271204 LOC103646885 LOC103641439 LOC103829742 LOC100262197 LOC7491136 LOC11405605 LOC123043256 LOC123051124 LOC123187076 LOC123424415 LOC107963867 LOC107943085 LOC125585447 LOC106352589 LOC8080240 LOC102606148 LOC102606993 LOC100838257 LOC107783511 LOC107776384
Function* uncharacterized protein zinc finger (CCCH-type) family protein zinc finger CCCH domain-containing protein 24 zinc finger CCCH domain-containing protein 24 zinc finger CCCH domain-containing protein 24 zinc finger CCCH domain-containing protein 24 zinc finger CCCH domain-containing protein 24 zinc finger CCCH domain-containing protein 24 zinc finger CCCH domain-containing protein 24 zinc finger CCCH domain-containing protein 24 zinc finger CCCH domain-containing protein 24 zinc finger CCCH domain-containing protein 24 zinc finger CCCH domain-containing protein 24 zinc finger CCCH domain-containing protein 24 zinc finger CCCH domain-containing protein 24 zinc finger CCCH domain-containing protein 24 zinc finger CCCH domain-containing protein 24 zinc finger CCCH domain-containing protein 24 zinc finger CCCH domain-containing protein 24-like zinc finger CCCH domain-containing protein 24 zinc finger CCCH domain-containing protein 24 zinc finger CCCH domain-containing protein 24 zinc finger CCCH domain-containing protein 24 zinc finger CCCH domain-containing protein 24 zinc finger CCCH domain-containing protein 24 zinc finger CCCH domain-containing protein 24-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 3
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma03015 mRNA surveillance pathway 3
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 6
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 11
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 7
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 3
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr00970 Aminoacyl-tRNA biosynthesis 2
mtr03013 Nucleocytoplasmic transport 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 4
ghi00670 One carbon pool by folate 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 4
ghi00670 One carbon pool by folate 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5725352 817393 100816103 100777601 101256158 9271204 103646885 103641439 103829742 100262197 7491136 11405605 123043256 123051124 123187076 123424415 107963867 107943085 125585447 106352589 8080240 102606148 102606993 100838257 107783511 107776384
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