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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_02g103800v5   uncharacterized protein 
 cre-r.1   CHLRE_01g022750v5   uncharacterized protein 
 cre-r.1   CHLRE_11g479250v5   uncharacterized protein 
 ath-u.5   RANGAP1   RAN GTPase activating protein 1 
 ath-u.5   RANGAP2   RAN GTPase activating protein 2 
 gma-u.5   100819800   RAN GTPase-activating protein 1 
 gma-u.5   100795339   RAN GTPase-activating protein 2 
 gma-u.5   100796487   RAN GTPase-activating protein 1 
 sly-u.5   101248044   RAN GTPase-activating protein 2 
 sly-u.5   101256036   RAN GTPase-activating protein 1 
 osa-u.5   4339487   RAN GTPase-activating protein 1 
 zma-u.5   100191507   putative RAN GTPase activating family protein 
 zma-u.5   100381804   uncharacterized LOC100381804 
 zma-u.5   118473451   RAN GTPase-activating protein 2-like 
 bra-r.6   103862716   RAN GTPase-activating protein 1 
 bra-r.6   103842117   RAN GTPase-activating protein 1 
 bra-r.6   103845763   RAN GTPase-activating protein 2 
 vvi-u.5   100244330   RAN GTPase-activating protein 1 
 vvi-u.5   100259658   RAN GTPase-activating protein 2 
 ppo-u.5   7464835   RAN GTPase-activating protein 1 
 ppo-u.5   7474224   RAN GTPase-activating protein 2 
 ppo-u.5   7480697   RAN GTPase-activating protein 1 
 mtr-u.5   11433283   RAN GTPase-activating protein 1 
 tae-r.2   123055417   RAN GTPase-activating protein 2 
 tae-r.2   123181995   RAN GTPase-activating protein 2 
 tae-r.2   123062887   RAN GTPase-activating protein 2 
 hvu-r.1   123442426   RAN GTPase-activating protein 2-like 
 hvu-r.1   123445076   RAN GTPase-activating protein 2-like 
 ghi-r.1   121220228   RAN GTPase-activating protein 1 
 ghi-r.1   107960931   RAN GTPase-activating protein 1 
 ghi-r.1   107951837   RAN GTPase-activating protein 1 
 bna-r.1   106415712   RAN GTPase-activating protein 1 
 bna-r.1   106367887   RAN GTPase-activating protein 2-like 
 bna-r.1   106369307   RAN GTPase-activating protein 1 
 sbi-r.1   8072471   RAN GTPase-activating protein 2 
 sbi-r.1   8072476   RAN GTPase-activating protein 2 
 sot-r.1   RANGAP1   Ran GTPase-activating protein 1 
 sot-r.1   RANGAP2   Ran GTPase-activating protein 2 
 cit-r.1   102613754   RAN GTPase-activating protein 1 
 cit-r.1   102615184   RAN GTPase-activating protein 2 
 bdi-r.1   100822881   RAN GTPase-activating protein 2 
 bdi-r.1   100829105   RAN GTPase-activating protein 2 
 nta-r.1   107776073   RAN GTPase-activating protein 1-like 
 nta-r.1   107776378   RAN GTPase-activating protein 2 
 nta-r.1   107779758   RAN GTPase-activating protein 2 

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Top 50 coexpressed genes to CHLRE_02g103800v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_02g103800v5 (cre-r.1 coexpression data)

CoexMap"5725542"


creCHLRE_02g103800v5 | Entrez gene ID : 5725542      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 3 2 3 2 1 3 3 2 3 1 3 2 3 3 2 2 2 2 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0090630 [list] [network] activation of GTPase activity  (16 genes)  IEA  
GO:0006913 [list] [network] nucleocytoplasmic transport  (97 genes)  IEA  
GO CC
GO:0048471 [list] [network] perinuclear region of cytoplasm  (13 genes)  IEA  
GO:0005829 [list] [network] cytosol  (481 genes)  IEA  
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0031267 [list] [network] small GTPase binding  (32 genes)  IEA  
GO:0005096 [list] [network] GTPase activator activity  (37 genes)  IEA  
Protein XP_042927399.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 1,  mito 1  (predict for XP_042927399.1)
Subcellular
localization
TargetP
other 5  (predict for XP_042927399.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_02g103800v5
cre-r.1
for
CHLRE_01g022750v5
cre-r.1
for
CHLRE_11g479250v5
ath-u.5
for
RANGAP1
ath-u.5
for
RANGAP2
gma-u.5
for
100819800
gma-u.5
for
100795339
gma-u.5
for
100796487
sly-u.5
for
101248044
sly-u.5
for
101256036
osa-u.5
for
4339487
zma-u.5
for
100191507
zma-u.5
for
100381804
zma-u.5
for
118473451
bra-r.6
for
103862716
bra-r.6
for
103842117
bra-r.6
for
103845763
vvi-u.5
for
100244330
vvi-u.5
for
100259658
ppo-u.5
for
7464835
ppo-u.5
for
7474224
ppo-u.5
for
7480697
mtr-u.5
for
11433283
tae-r.2
for
123055417
tae-r.2
for
123181995
tae-r.2
for
123062887
hvu-r.1
for
123442426
hvu-r.1
for
123445076
ghi-r.1
for
121220228
ghi-r.1
for
107960931
ghi-r.1
for
107951837
bna-r.1
for
106415712
bna-r.1
for
106367887
bna-r.1
for
106369307
sbi-r.1
for
8072471
sbi-r.1
for
8072476
sot-r.1
for
RANGAP1
sot-r.1
for
RANGAP2
cit-r.1
for
102613754
cit-r.1
for
102615184
bdi-r.1
for
100822881
bdi-r.1
for
100829105
nta-r.1
for
107776073
nta-r.1
for
107776378
nta-r.1
for
107779758


Ortholog ID: 2739
Species cre cre cre ath ath gma gma gma sly sly osa zma zma zma bra bra bra vvi vvi ppo ppo ppo mtr tae tae tae hvu hvu ghi ghi ghi bna bna bna sbi sbi sot sot cit cit bdi bdi nta nta nta
Symbol CHLRE_02g103800v5 CHLRE_01g022750v5 CHLRE_11g479250v5 RANGAP1 RANGAP2 LOC100819800 LOC100796487 LOC100785942 LOC101248044 LOC101256036 LOC4339487 LOC100191507 LOC100381804 LOC118473451 LOC103862716 LOC103842117 LOC103845763 LOC100244330 LOC100259658 LOC7464835 LOC7474224 LOC7480697 LOC11433283 LOC123055417 LOC123071744 LOC123132512 LOC123442426 LOC123445076 LOC121220228 LOC107960931 LOC107897691 LOC106415712 LOC106369307 LOC106375243 LOC8072471 LOC8072476 RANGAP1 RANGAP2 LOC102613754 LOC102615184 LOC100822881 LOC100829105 LOC107776073 LOC107776378 LOC107804233
Function* uncharacterized protein uncharacterized protein uncharacterized protein RAN GTPase activating protein 1 RAN GTPase activating protein 2 RAN GTPase-activating protein 1 RAN GTPase-activating protein 1 RAN GTPase-activating protein 2 RAN GTPase-activating protein 2 RAN GTPase-activating protein 1 RAN GTPase-activating protein 1 putative RAN GTPase activating family protein uncharacterized LOC100381804 RAN GTPase-activating protein 2-like RAN GTPase-activating protein 1 RAN GTPase-activating protein 1 RAN GTPase-activating protein 2 RAN GTPase-activating protein 1 RAN GTPase-activating protein 2 RAN GTPase-activating protein 1 RAN GTPase-activating protein 2 RAN GTPase-activating protein 1 RAN GTPase-activating protein 1 RAN GTPase-activating protein 2 RAN GTPase-activating protein 2 RAN GTPase-activating protein 2 RAN GTPase-activating protein 2-like RAN GTPase-activating protein 2-like RAN GTPase-activating protein 1 RAN GTPase-activating protein 1 RAN GTPase-activating protein 2 RAN GTPase-activating protein 1 RAN GTPase-activating protein 1 RAN GTPase-activating protein 1-like RAN GTPase-activating protein 2 RAN GTPase-activating protein 2 Ran GTPase-activating protein 1 Ran GTPase-activating protein 2 RAN GTPase-activating protein 1 RAN GTPase-activating protein 2 RAN GTPase-activating protein 2 RAN GTPase-activating protein 2 RAN GTPase-activating protein 1-like RAN GTPase-activating protein 2 RAN GTPase-activating protein 2-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 11
cre03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 3
gma03410 Base excision repair 3
gma03420 Nucleotide excision repair 3
gma03430 Mismatch repair 3
gma04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 4
gma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 3
sly03410 Base excision repair 3
sly03420 Nucleotide excision repair 2
sly03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 5
osa03050 Proteasome 3
osa00970 Aminoacyl-tRNA biosynthesis 3
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03008 Ribosome biogenesis in eukaryotes 2
zma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03020 RNA polymerase 3
zma03420 Nucleotide excision repair 3
zma03050 Proteasome 2
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04814 Motor proteins 3
bra00230 Purine metabolism 2
bra00240 Pyrimidine metabolism 2
bra00480 Glutathione metabolism 2
bra01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
vvi03050 Proteasome 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00240 Pyrimidine metabolism 2
ppo01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00270 Cysteine and methionine metabolism 3
ppo00541 Biosynthesis of various nucleotide sugars 3
ppo01240 Biosynthesis of cofactors 3
ppo01250 Biosynthesis of nucleotide sugars 3
ppo00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 2
ppo03013 Nucleocytoplasmic transport 2
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 7
tae03440 Homologous recombination 3
tae03460 Fanconi anemia pathway 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 7
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
tae00061 Fatty acid biosynthesis 3
tae00071 Fatty acid degradation 3
tae01212 Fatty acid metabolism 3
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03020 RNA polymerase 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00770 Pantothenate and CoA biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00230 Purine metabolism 2
sot00240 Pyrimidine metabolism 2
sot00480 Glutathione metabolism 2
sot01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 6
cit04141 Protein processing in endoplasmic reticulum 3
cit03013 Nucleocytoplasmic transport 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 2
cit00190 Oxidative phosphorylation 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 5
bdi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 6
nta00230 Purine metabolism 4
nta00250 Alanine, aspartate and glutamate metabolism 4
nta01232 Nucleotide metabolism 4
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 3
nta03015 mRNA surveillance pathway 2
nta03013 Nucleocytoplasmic transport 2
nta00260 Glycine, serine and threonine metabolism 2
nta00460 Cyanoamino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5725542 5715232 5722908 825488 832052 100819800 100796487 100785942 101248044 101256036 4339487 100191507 100381804 118473451 103862716 103842117 103845763 100244330 100259658 7464835 7474224 7480697 11433283 123055417 123071744 123132512 123442426 123445076 121220228 107960931 107897691 106415712 106369307 106375243 8072471 8072476 102577850 102577808 102613754 102615184 100822881 100829105 107776073 107776378 107804233
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