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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_01g055050v5   uncharacterized protein 
 ath-u.5   AT5G60190   Cysteine proteinases superfamily protein 
 gma-u.5   100800268   NEDD8-specific protease 1-like 
 sly-u.5   101249546   NEDD8-specific protease 1 
 osa-u.5   4351243   uncharacterized LOC4351243 
 osa-u.5   4349534   uncharacterized LOC4349534 
 zma-u.5   103641153   NEDD8-specific protease 1 
 bra-r.6   103856581   NEDD8-specific protease 1 
 bra-r.6   103845432   NEDD8-specific protease 1 
 vvi-u.5   104879564   NEDD8-specific protease 1 
 ppo-u.5   7478874   NEDD8-specific protease 1 
 mtr-u.5   11408023   NEDD8-specific protease 1 
 tae-r.2   123103252   WRKY transcription factor 44 
 tae-r.2   123120569   WRKY transcription factor 44 
 ghi-r.1   107959256   NEDD8-specific protease 1 
 ghi-r.1   121217636   NEDD8-specific protease 1 
 bna-r.1   106385143   NEDD8-specific protease 1 
 bna-r.1   106413968   NEDD8-specific protease 1 
 bna-r.1   106419663   NEDD8-specific protease 1 
 sbi-r.1   8072154   uncharacterized LOC8072154 
 sot-r.1   102591038   NEDD8-specific protease 1 
 cit-r.1   102628280   NEDD8-specific protease 1 
 bdi-r.1   104584815   NEDD8-specific protease 1 
 nta-r.1   107762236   NEDD8-specific protease 1-like 
 nta-r.1   107784714   NEDD8-specific protease 1-like 

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Top 50 coexpressed genes to CHLRE_01g055050v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_01g055050v5 (cre-r.1 coexpression data)

CoexMap"5725777"


creCHLRE_01g055050v5 | Entrez gene ID : 5725777      
Species cre ath gma sly osa zma bra vvi ppo mtr tae ghi bna sbi sot cit bdi nta hvu
Paralog 1 1 1 1 2 1 2 1 1 1 2 2 3 1 1 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006508 [list] [network] proteolysis  (404 genes)  IEA  
GO CC
GO MF
GO:0019784 [list] [network] deNEDDylase activity  (2 genes)  IEA  
GO:0008234 [list] [network] cysteine-type peptidase activity  (83 genes)  IEA  
Protein XP_001700226.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_001700226.1)
Subcellular
localization
TargetP
other 9  (predict for XP_001700226.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_01g055050v5
ath-u.5
for
AT5G60190
gma-u.5
for
100800268
sly-u.5
for
101249546
osa-u.5
for
4351243
osa-u.5
for
4349534
zma-u.5
for
103641153
bra-r.6
for
103856581
bra-r.6
for
103845432
vvi-u.5
for
104879564
ppo-u.5
for
7478874
mtr-u.5
for
11408023
tae-r.2
for
123103252
tae-r.2
for
123120569
ghi-r.1
for
107959256
ghi-r.1
for
121217636
bna-r.1
for
106385143
bna-r.1
for
106413968
bna-r.1
for
106419663
sbi-r.1
for
8072154
sot-r.1
for
102591038
cit-r.1
for
102628280
bdi-r.1
for
104584815
nta-r.1
for
107762236
nta-r.1
for
107784714


Ortholog ID: 8662
Species cre ath gma sly osa osa zma bra bra vvi ppo mtr tae tae ghi ghi bna bna bna sbi sot cit bdi nta nta
Symbol CHLRE_01g055050v5 AT5G60190 LOC100800268 LOC101249546 LOC4351243 LOC4349534 LOC103641153 LOC103856581 LOC103845432 LOC104879564 LOC7478874 LOC11408023 LOC123103252 LOC123120569 LOC107959256 LOC121217636 LOC106385143 LOC106413968 LOC106419663 LOC8072154 LOC102591038 LOC102628280 LOC104584815 LOC107762236 LOC107784714
Function* uncharacterized protein Cysteine proteinases superfamily protein NEDD8-specific protease 1-like NEDD8-specific protease 1 uncharacterized LOC4351243 uncharacterized LOC4349534 NEDD8-specific protease 1 NEDD8-specific protease 1 NEDD8-specific protease 1 NEDD8-specific protease 1 NEDD8-specific protease 1 NEDD8-specific protease 1 WRKY transcription factor 44 WRKY transcription factor 44 NEDD8-specific protease 1 NEDD8-specific protease 1 NEDD8-specific protease 1 NEDD8-specific protease 1 NEDD8-specific protease 1 uncharacterized LOC8072154 NEDD8-specific protease 1 NEDD8-specific protease 1 NEDD8-specific protease 1 NEDD8-specific protease 1-like NEDD8-specific protease 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 4
sly03008 Ribosome biogenesis in eukaryotes 3
sly03083 Polycomb repressive complex 3
sly04712 Circadian rhythm - plant 3
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 2
bra01240 Biosynthesis of cofactors 2
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 8
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 8
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
sot04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5725777 836141 100800268 101249546 4351243 4349534 103641153 103856581 103845432 104879564 7478874 11408023 123103252 123120569 107959256 121217636 106385143 106413968 106419663 8072154 102591038 102628280 104584815 107762236 107784714
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