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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_01g063267v5   uncharacterized protein 
 ath-u.5   AT1G31660   bystin-like protein 
 gma-u.5   100812921   bystin 
 gma-u.5   100812699   bystin 
 sly-u.5   101267909   bystin-like protein 
 osa-u.5   4346824   bystin 
 zma-u.5   100274326   uncharacterized LOC100274326 
 bra-r.6   103828778   bystin 
 bra-r.6   103840231   bystin 
 vvi-u.5   100251935   bystin 
 vvi-u.5   100256263   bystin 
 ppo-u.5   18095518   bystin 
 ppo-u.5   7491026   bystin 
 mtr-u.5   11410964   bystin 
 tae-r.2   123191071   bystin 
 tae-r.2   123047436   bystin 
 tae-r.2   123055236   bystin 
 hvu-r.1   123428318   bystin 
 ghi-r.1   107954112   bystin 
 ghi-r.1   107953158   bystin 
 bna-r.1   106355107   bystin 
 bna-r.1   106364597   bystin-like 
 bna-r.1   106401830   bystin-like 
 sbi-r.1   8076476   bystin 
 sot-r.1   102602942   bystin 
 cit-r.1   102606860   bystin 
 bdi-r.1   100828159   bystin 
 bdi-r.1   100827043   bystin 
 nta-r.1   107799512   bystin 
 nta-r.1   107807361   bystin 

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Top 50 coexpressed genes to CHLRE_01g063267v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_01g063267v5 (cre-r.1 coexpression data)

CoexMap"5725792"


creCHLRE_01g063267v5 | Entrez gene ID : 5725792    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 1 2 2 2 1 3 1 2 3 1 1 1 2 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006364 [list] [network] rRNA processing  (218 genes)  IEA  
GO CC
GO:0030688 [list] [network] preribosome, small subunit precursor  (12 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (152 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (2907 genes)  IEA  
GO MF
GO:0030515 [list] [network] snoRNA binding  (19 genes)  IEA  
Protein XP_042928985.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 2,  cyto 2,  cyto_nucl 2  (predict for XP_042928985.1)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for XP_042928985.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_01g063267v5
ath-u.5
for
AT1G31660
gma-u.5
for
100812921
gma-u.5
for
100812699
sly-u.5
for
101267909
osa-u.5
for
4346824
zma-u.5
for
100274326
bra-r.6
for
103828778
bra-r.6
for
103840231
vvi-u.5
for
100251935
vvi-u.5
for
100256263
ppo-u.5
for
18095518
ppo-u.5
for
7491026
mtr-u.5
for
11410964
tae-r.2
for
123191071
tae-r.2
for
123047436
tae-r.2
for
123055236
hvu-r.1
for
123428318
ghi-r.1
for
107954112
ghi-r.1
for
107953158
bna-r.1
for
106355107
bna-r.1
for
106364597
bna-r.1
for
106401830
sbi-r.1
for
8076476
sot-r.1
for
102602942
cit-r.1
for
102606860
bdi-r.1
for
100828159
bdi-r.1
for
100827043
nta-r.1
for
107799512
nta-r.1
for
107807361


Ortholog ID: 7828
Species cre ath gma gma sly osa zma bra bra vvi vvi ppo ppo mtr tae tae tae hvu ghi ghi bna bna bna sbi sot cit bdi bdi nta nta
Symbol CHLRE_01g063267v5 AT1G31660 LOC100812921 LOC100812699 LOC101267909 LOC4346824 LOC100274326 LOC103828778 LOC103840231 LOC100251935 LOC100256263 LOC18095518 LOC7491026 LOC11410964 LOC123191071 LOC123047436 LOC123055236 LOC123428318 LOC107954112 LOC107953158 LOC106355107 LOC106364597 LOC106401830 LOC8076476 LOC102602942 LOC102606860 LOC100828159 LOC100827043 LOC107799512 LOC107807361
Function* uncharacterized protein bystin-like protein bystin bystin bystin-like protein bystin uncharacterized LOC100274326 bystin bystin bystin bystin bystin bystin bystin bystin bystin bystin bystin bystin bystin bystin bystin-like bystin-like bystin bystin bystin bystin bystin bystin bystin
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 2
tae03420 Nucleotide excision repair 2
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae03022 Basal transcription factors 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5725792 840053 100812921 100812699 101267909 4346824 100274326 103828778 103840231 100251935 100256263 18095518 7491026 11410964 123191071 123047436 123055236 123428318 107954112 107953158 106355107 106364597 106401830 8076476 102602942 102606860 100828159 100827043 107799512 107807361
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