ATTED-II : GeneCoexpression result

Species	Gene	Description
cre-r.1	CHLRE_01g008000v5	uncharacterized protein
ath-u.5	AT3G16220	Putative eukaryotic LigT
ath-u.5	AT3G16230	Putative eukaryotic LigT
gma-u.5	100785531	uncharacterized LOC100785531
sly-u.5	101268850	uncharacterized LOC101268850
sly-u.5	101249781	uncharacterized LOC101249781
osa-u.5	4325893	uncharacterized LOC4325893
osa-u.5	4325894	uncharacterized LOC4325894
zma-u.5	103649543	Activating signal cointegrator 1 complex subunit 1
bra-r.6	103859659	activating signal cointegrator 1 complex subunit 1
bra-r.6	103840113	uncharacterized LOC103840113
bra-r.6	103840105	uncharacterized LOC103840105
vvi-u.5	100266864	uncharacterized LOC100266864
ppo-u.5	7475086	uncharacterized LOC7475086
mtr-u.5	11420973	uncharacterized LOC11420973
tae-r.2	123060803	activating signal cointegrator 1 complex subunit 1
tae-r.2	123069365	activating signal cointegrator 1 complex subunit 1
hvu-r.1	123443263	activating signal cointegrator 1 complex subunit 1
ghi-r.1	107891710	uncharacterized LOC107891710
ghi-r.1	107889109	uncharacterized LOC107889109
ghi-r.1	107950695	uncharacterized LOC107950695
bna-r.1	106373775	uncharacterized LOC106373775
bna-r.1	106358143	activating signal cointegrator 1 complex subunit 1
bna-r.1	106356377	uncharacterized LOC106356377
sbi-r.1	8078103	activating signal cointegrator 1 complex subunit 1
sot-r.1	102605557	activating signal cointegrator 1 complex subunit 1-like
sot-r.1	102596069	activating signal cointegrator 1 complex subunit 1
cit-r.1	102623371	uncharacterized LOC102623371
bdi-r.1	100837554	activating signal cointegrator 1 complex subunit 1
nta-r.1	107817119	uncharacterized LOC107817119
nta-r.1	107814231	uncharacterized LOC107814231
nta-r.1	107802500	uncharacterized LOC107802500

Annotation

functional annotation

KEGG

GO BP

GO:0006307 [list] [network] DNA alkylation repair	(3 genes)	IEA
GO:0006355 [list] [network] regulation of DNA-templated transcription	(405 genes)	IEA

GO CC

GO:0005634 [list] [network] nucleus

(1576 genes)

IEA

GO MF

GO:0003723 [list] [network] RNA binding

(670 genes)

IEA

Protein

XP_042928153.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 8, chlo 2

(predict for XP_042928153.1)

Subcellular
localization
TargetP

other 5, mito 4

(predict for XP_042928153.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_01g008000v5	ath-u.5 for AT3G16220	ath-u.5 for AT3G16230	gma-u.5 for 100785531	sly-u.5 for 101268850	sly-u.5 for 101249781	osa-u.5 for 4325893	osa-u.5 for 4325894	zma-u.5 for 103649543	bra-r.6 for 103859659	bra-r.6 for 103840113	bra-r.6 for 103840105	vvi-u.5 for 100266864	ppo-u.5 for 7475086	mtr-u.5 for 11420973	tae-r.2 for 123060803	tae-r.2 for 123069365	hvu-r.1 for 123443263	ghi-r.1 for 107891710	ghi-r.1 for 107889109	ghi-r.1 for 107950695	bna-r.1 for 106373775	bna-r.1 for 106358143	bna-r.1 for 106356377	sbi-r.1 for 8078103	sot-r.1 for 102605557	sot-r.1 for 102596069	cit-r.1 for 102623371	bdi-r.1 for 100837554	nta-r.1 for 107817119	nta-r.1 for 107814231	nta-r.1 for 107802500

Ortholog

Ortholog ID: 4548

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

Function^*

uncharacterized protein

Putative eukaryotic LigT

uncharacterized LOC100785531

uncharacterized LOC101268850

uncharacterized LOC101249781

uncharacterized LOC4325893

uncharacterized LOC4325894

Activating signal cointegrator 1 complex subunit 1