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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g493950v5   uncharacterized protein 
 ath-u.5   EMB3137   Ribosomal protein S13/S18 family 
 gma-u.5   100500355   30S ribosomal protein S13 
 gma-u.5   100499902   30S ribosomal protein S13, chloroplastic 
 sly-u.5   101260136   30S ribosomal protein S13 
 osa-u.5   4333848   small ribosomal subunit protein uS13c 
 zma-u.5   100283244   30S ribosomal protein S13, chloroplastic-like 
 bra-r.6   103856071   30S ribosomal protein S13, chloroplastic 
 bra-r.6   103846495   30S ribosomal protein S13, chloroplastic 
 vvi-u.5   100254016   small ribosomal subunit protein uS13c 
 ppo-u.5   7495117   30S ribosomal protein S13, chloroplastic 
 ppo-u.5   7469127   30S ribosomal protein S13, chloroplastic 
 mtr-u.5   11406792   30S ribosomal protein S13, chloroplastic 
 tae-r.2   123090813   30S ribosomal protein S13, chloroplastic 
 tae-r.2   123087150   30S ribosomal protein S13, chloroplastic 
 hvu-r.1   123409273   30S ribosomal protein S13, chloroplastic-like 
 hvu-r.1   123447354   30S ribosomal protein S13, chloroplastic-like 
 ghi-r.1   107910261   30S ribosomal protein S13, chloroplastic 
 ghi-r.1   107951440   30S ribosomal protein S13, chloroplastic 
 bna-r.1   106418399   30S ribosomal protein S13, chloroplastic 
 bna-r.1   106367222   30S ribosomal protein S13, chloroplastic-like 
 bna-r.1   106372067   30S ribosomal protein S13, chloroplastic-like 
 sbi-r.1   110436562   30S ribosomal protein S13, chloroplastic-like 
 sot-r.1   102582667   30S ribosomal protein S13, chloroplastic 
 cit-r.1   102612251   30S ribosomal protein S13, chloroplastic 
 bdi-r.1   100833335   30S ribosomal protein S13, chloroplastic 
 nta-r.1   107812601   small ribosomal subunit protein uS13c-like 
 nta-r.1   107823491   small ribosomal subunit protein uS13c 

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Top 50 coexpressed genes to CHLRE_12g493950v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g493950v5 (cre-r.1 coexpression data)

CoexMap"5726085"


creCHLRE_12g493950v5 | Entrez gene ID : 5726085      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 1 2 1 2 1 2 2 2 3 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03010 [list] [network] Ribosome (149 genes)
GO BP
GO:0006412 [list] [network] translation  (268 genes)  IEA  
GO CC
GO:0015935 [list] [network] small ribosomal subunit  (50 genes)  IEA  
GO:0005840 [list] [network] ribosome  (168 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (441 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (164 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (670 genes)  IEA  
Protein XP_001700563.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  mito 1  (predict for XP_001700563.1)
Subcellular
localization
TargetP
mito 7,  chlo 6  (predict for XP_001700563.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g493950v5
ath-u.5
for
EMB3137
gma-u.5
for
100500355
gma-u.5
for
100499902
sly-u.5
for
101260136
osa-u.5
for
4333848
zma-u.5
for
100283244
bra-r.6
for
103856071
bra-r.6
for
103846495
vvi-u.5
for
100254016
ppo-u.5
for
7495117
ppo-u.5
for
7469127
mtr-u.5
for
11406792
tae-r.2
for
123090813
tae-r.2
for
123087150
hvu-r.1
for
123409273
hvu-r.1
for
123447354
ghi-r.1
for
107910261
ghi-r.1
for
107951440
bna-r.1
for
106418399
bna-r.1
for
106367222
bna-r.1
for
106372067
sbi-r.1
for
110436562
sot-r.1
for
102582667
cit-r.1
for
102612251
bdi-r.1
for
100833335
nta-r.1
for
107812601
nta-r.1
for
107823491


Ortholog ID: 5831
Species cre ath gma gma sly osa zma bra bra vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna bna sbi sot cit bdi nta nta
Symbol CHLRE_12g493950v5 EMB3137 LOC100500355 LOC100499902 LOC101260136 LOC4333848 LOC100283244 LOC103856071 LOC103846495 LOC100254016 LOC7495117 LOC7469127 LOC11406792 LOC123087150 LOC123095823 LOC123409273 LOC123447354 LOC107910261 LOC107951440 LOC106418399 LOC106431539 LOC111201472 LOC110436562 LOC102582667 LOC102612251 LOC100833335 LOC107812601 LOC107823491
Function* uncharacterized protein Ribosomal protein S13/S18 family 30S ribosomal protein S13 30S ribosomal protein S13, chloroplastic 30S ribosomal protein S13 small ribosomal subunit protein uS13c 30S ribosomal protein S13, chloroplastic-like 30S ribosomal protein S13, chloroplastic 30S ribosomal protein S13, chloroplastic small ribosomal subunit protein uS13c 30S ribosomal protein S13, chloroplastic 30S ribosomal protein S13, chloroplastic 30S ribosomal protein S13, chloroplastic 30S ribosomal protein S13, chloroplastic 30S ribosomal protein S13, chloroplastic 30S ribosomal protein S13, chloroplastic-like 30S ribosomal protein S13, chloroplastic-like 30S ribosomal protein S13, chloroplastic 30S ribosomal protein S13, chloroplastic 30S ribosomal protein S13, chloroplastic 30S ribosomal protein S13, chloroplastic-like 30S ribosomal protein S13, chloroplastic-like 30S ribosomal protein S13, chloroplastic-like 30S ribosomal protein S13, chloroplastic 30S ribosomal protein S13, chloroplastic 30S ribosomal protein S13, chloroplastic small ribosomal subunit protein uS13c-like small ribosomal subunit protein uS13c
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
ghi00190 Oxidative phosphorylation 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
ghi00190 Oxidative phosphorylation 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 12
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5726085 831282 100500355 100499902 101260136 4333848 100283244 103856071 103846495 100254016 7495117 7469127 11406792 123087150 123095823 123409273 123447354 107910261 107951440 106418399 106431539 111201472 110436562 102582667 102612251 100833335 107812601 107823491
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