ATTED-II : GeneCoexpression result

Species	Gene	Description
cre-r.1	CHLRE_15g636300v5	uncharacterized protein
ath-u.5	EMB2804	tubulin folding cofactor B
gma-u.5	100500664	ubiquitin-like and CAP-Gly domains-containing protein
sly-u.5	101252670	tubulin-folding cofactor B
osa-u.5	4337511	tubulin-folding cofactor B
zma-u.5	100193227	uncharacterized LOC100193227
bra-r.6	103870481	tubulin-folding cofactor B
vvi-u.5	100250251	tubulin-folding cofactor B
ppo-u.5	7473569	tubulin-folding cofactor B
mtr-u.5	25483301	tubulin-folding cofactor B
mtr-u.5	25479452	tubulin-folding cofactor B
tae-r.2	123055424	tubulin-folding cofactor B
tae-r.2	123191248	tubulin-folding cofactor B
tae-r.2	123047615	tubulin-folding cofactor B
hvu-r.1	123428569	tubulin-folding cofactor B
ghi-r.1	107948939	tubulin-folding cofactor B
ghi-r.1	107895011	tubulin-folding cofactor B
ghi-r.1	107899549	tubulin-folding cofactor B
bna-r.1	125587915	tubulin-folding cofactor B
bna-r.1	125594206	tubulin-folding cofactor B-like
sbi-r.1	8064300	tubulin-folding cofactor B
sot-r.1	102578402	tubulin-folding cofactor B
cit-r.1	102609164	tubulin-folding cofactor B
bdi-r.1	100839656	tubulin-folding cofactor B
nta-r.1	107767110	tubulin-folding cofactor B
nta-r.1	107821699	tubulin-folding cofactor B-like
nta-r.1	107827820	tubulin-folding cofactor B-like

Annotation

functional annotation

KEGG

GO BP

GO:0007023 [list] [network] post-chaperonin tubulin folding pathway	(4 genes)	IEA
GO:0007021 [list] [network] tubulin complex assembly	(5 genes)	IEA
GO:0031122 [list] [network] cytoplasmic microtubule organization	(14 genes)	IEA

GO CC

GO:0035371 [list] [network] microtubule plus-end	(3 genes)	IEA
GO:0005634 [list] [network] nucleus	(1576 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(2907 genes)	IEA

GO MF

GO:0043014 [list] [network] alpha-tubulin binding	(3 genes)	IEA
GO:0051010 [list] [network] microtubule plus-end binding	(3 genes)	IEA

Protein

XP_042916400.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, cysk 2, chlo 1, mito 1, plas 1, pero 1, chlo_mito 1, mito_plas 1

(predict for XP_042916400.1)

Subcellular
localization
TargetP

other 8

(predict for XP_042916400.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_15g636300v5	ath-u.5 for EMB2804	gma-u.5 for 100500664	sly-u.5 for 101252670	osa-u.5 for 4337511	zma-u.5 for 100193227	bra-r.6 for 103870481	vvi-u.5 for 100250251	ppo-u.5 for 7473569	mtr-u.5 for 25483301	mtr-u.5 for 25479452	tae-r.2 for 123055424	tae-r.2 for 123191248	tae-r.2 for 123047615	hvu-r.1 for 123428569	ghi-r.1 for 107948939	ghi-r.1 for 107895011	ghi-r.1 for 107899549	bna-r.1 for 125587915	bna-r.1 for 125594206	sbi-r.1 for 8064300	sot-r.1 for 102578402	cit-r.1 for 102609164	bdi-r.1 for 100839656	nta-r.1 for 107767110	nta-r.1 for 107821699	nta-r.1 for 107827820

Ortholog

Ortholog ID: 6546

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

EMB2804

Function^*

uncharacterized protein

tubulin folding cofactor B

ubiquitin-like and CAP-Gly domains-containing protein

tubulin-folding cofactor B

uncharacterized LOC100193227

tubulin-folding cofactor B

tubulin-folding cofactor B-like

tubulin-folding cofactor B

tubulin-folding cofactor B-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
gma01230	Biosynthesis of amino acids	3
gma03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	3
sly03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	6
bra00190	Oxidative phosphorylation	3
bra00020	Citrate cycle (TCA cycle)	2
bra01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00520	Amino sugar and nucleotide sugar metabolism	3
vvi00600	Sphingolipid metabolism	2
vvi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	3
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00270	Cysteine and methionine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00230	Purine metabolism	4
ghi01232	Nucleotide metabolism	4
ghi04820	Cytoskeleton in muscle cells	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00230	Purine metabolism	2
ghi01232	Nucleotide metabolism	2
ghi04820	Cytoskeleton in muscle cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00230	Purine metabolism	4
ghi01232	Nucleotide metabolism	4
ghi04820	Cytoskeleton in muscle cells	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	4
bdi00510	N-Glycan biosynthesis	2
bdi00513	Various types of N-glycan biosynthesis	2
bdi03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	3
nta03040	Spliceosome	3
nta04130	SNARE interactions in vesicular transport	3
nta04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	5
nta03040	Spliceosome	4
nta03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	3
nta03015	mRNA surveillance pathway	2
nta03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

5726182

820184

100500664

101252670

4337511

100193227

103870481

100250251

7473569

25483301

25479452

123055424

123191248

123047615

123428569

107948939

107895011

107899549

125594206

106452666

8064300

102578402

102609164

100839656

107767110

107821699

107827820

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to CHLRE_15g636300v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_15g636300v5 (cre-r.1 coexpression data)


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	1	1	1	1	1	1	1	1	2	3	1	3	2	1	1	1	1	3

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_15g636300v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_15g636300v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**