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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_07g320800v5   uncharacterized protein 
 ath-u.5   AT4G20325   ribonuclease H2 subunit B 
 gma-u.5   100305835   ribonuclease H2-B superfamily protein 
 sly-u.5   101257370   uncharacterized LOC101257370 
 osa-u.5   9266900   uncharacterized LOC9266900 
 zma-u.5   100216620   Ribonuclease H2 subunit B 
 vvi-u.5   100268103   uncharacterized LOC100268103 
 mtr-u.5   112420388   ribonuclease H2 subunit B 
 tae-r.2   123053628   ribonuclease H2 subunit B 
 tae-r.2   123189520   ribonuclease H2 subunit B 
 hvu-r.1   123426999   ribonuclease H2 subunit B 
 ghi-r.1   107947366   ribonuclease H2 subunit B 
 ghi-r.1   107946818   ribonuclease H2 subunit B 
 sbi-r.1   8058711   ribonuclease H2 subunit B 
 sot-r.1   102583627   ribonuclease H2 subunit B 
 cit-r.1   102607898   uncharacterized LOC102607898 
 bdi-r.1   100841903   ribonuclease H2 subunit B 
 nta-r.1   107809395   uncharacterized LOC107809395 
 nta-r.1   107802128   uncharacterized LOC107802128 

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Top 50 coexpressed genes to CHLRE_07g320800v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_07g320800v5 (cre-r.1 coexpression data)

CoexMap"5726397"


creCHLRE_07g320800v5 | Entrez gene ID : 5726397      
Species cre ath gma sly osa zma vvi mtr tae hvu ghi sbi sot cit bdi nta bna bra ppo
Paralog 1 1 1 1 1 1 1 1 2 1 2 1 1 1 1 2 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03030 [list] [network] DNA replication (30 genes)
GO BP
GO:0006401 [list] [network] RNA catabolic process  (67 genes)  IEA  
GO:0009259 [list] [network] ribonucleotide metabolic process  (137 genes)  IEA  
GO CC
GO:0032299 [list] [network] ribonuclease H2 complex  (4 genes)  IEA  
GO:0005654 [list] [network] nucleoplasm  (152 genes)  IEA  
GO MF
Protein XP_001701034.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  nucl_plas 4,  chlo 2  (predict for XP_001701034.2)
Subcellular
localization
TargetP
mito 6,  other 5  (predict for XP_001701034.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_07g320800v5
ath-u.5
for
AT4G20325
gma-u.5
for
100305835
sly-u.5
for
101257370
osa-u.5
for
9266900
zma-u.5
for
100216620
vvi-u.5
for
100268103
mtr-u.5
for
112420388
tae-r.2
for
123053628
tae-r.2
for
123189520
hvu-r.1
for
123426999
ghi-r.1
for
107947366
ghi-r.1
for
107946818
sbi-r.1
for
8058711
sot-r.1
for
102583627
cit-r.1
for
102607898
bdi-r.1
for
100841903
nta-r.1
for
107809395
nta-r.1
for
107802128


Ortholog ID: 8329
Species cre ath gma sly osa zma vvi mtr tae tae hvu ghi ghi sbi sot cit bdi nta nta
Symbol CHLRE_07g320800v5 AT4G20325 LOC100305835 LOC101257370 LOC9266900 LOC100216620 LOC100268103 LOC112420388 LOC123053628 LOC123189520 LOC123426999 LOC107947366 LOC107946818 LOC8058711 LOC102583627 LOC102607898 LOC100841903 LOC107809395 LOC107802128
Function* uncharacterized protein ribonuclease H2 subunit B ribonuclease H2-B superfamily protein uncharacterized LOC101257370 uncharacterized LOC9266900 Ribonuclease H2 subunit B uncharacterized LOC100268103 ribonuclease H2 subunit B ribonuclease H2 subunit B ribonuclease H2 subunit B ribonuclease H2 subunit B ribonuclease H2 subunit B ribonuclease H2 subunit B ribonuclease H2 subunit B ribonuclease H2 subunit B uncharacterized LOC102607898 ribonuclease H2 subunit B uncharacterized LOC107809395 uncharacterized LOC107802128
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 4
cre03410 Base excision repair 3
cre03420 Nucleotide excision repair 2
cre03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 8
ath03420 Nucleotide excision repair 3
ath03430 Mismatch repair 3
ath03440 Homologous recombination 2
ath03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 4
osa03030 DNA replication 3
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 10
tae03430 Mismatch repair 2
tae03420 Nucleotide excision repair 2
tae03440 Homologous recombination 2
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 13
tae03430 Mismatch repair 2
tae03420 Nucleotide excision repair 2
tae03440 Homologous recombination 2
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
hvu03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 5
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 5
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
cit00510 N-Glycan biosynthesis 2
cit00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03030 DNA replication 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 10
nta03030 DNA replication 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5726397 5008148 100305835 101257370 9266900 100216620 100268103 112420388 123053628 123189520 123426999 107947366 107946818 8058711 102583627 102607898 100841903 107809395 107802128
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