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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_07g313700v5   uncharacterized protein 
 ath-u.5   ERS   glutamate tRNA synthetase 
 gma-u.5   100810730   glutamate--tRNA ligase, chloroplastic/mitochondrial 
 gma-u.5   100787983   glutamate--tRNA ligase, chloroplastic/mitochondrial 
 sly-u.5   101259201   glutamate--tRNA ligase, chloroplastic/mitochondrial 
 osa-u.5   4328118   glutamate--tRNA ligase, chloroplastic/mitochondrial 
 zma-u.5   103654929   glutamate--tRNA ligase, chloroplastic/mitochondrial 
 zma-u.5   100383787   Glutamate--tRNA ligase chloroplastic/mitochondrial 
 bra-r.6   103873823   glutamate--tRNA ligase, chloroplastic/mitochondrial 
 vvi-u.5   100250310   glutamate--tRNA ligase, chloroplastic/mitochondrial 
 ppo-u.5   7463354   glutamate--tRNA ligase, chloroplastic/mitochondrial 
 mtr-u.5   25500188   glutamate--tRNA ligase, chloroplastic/mitochondrial 
 tae-r.2   123135880   glutamate--tRNA ligase, chloroplastic/mitochondrial 
 tae-r.2   123131902   glutamate--tRNA ligase, chloroplastic/mitochondrial 
 tae-r.2   123143401   glutamate--tRNA ligase, chloroplastic/mitochondrial 
 hvu-r.1   123402953   glutamate--tRNA ligase, chloroplastic/mitochondrial 
 ghi-r.1   107928970   glutamate--tRNA ligase, chloroplastic/mitochondrial 
 ghi-r.1   107900975   glutamate--tRNA ligase, chloroplastic/mitochondrial 
 bna-r.1   106347958   glutamate--tRNA ligase, chloroplastic/mitochondrial 
 bna-r.1   106347903   glutamate--tRNA ligase, chloroplastic/mitochondrial 
 sbi-r.1   8068257   glutamate--tRNA ligase, chloroplastic/mitochondrial 
 sot-r.1   102577502   glutamate--tRNA ligase, chloroplastic/mitochondrial 
 cit-r.1   102612397   glutamate--tRNA ligase, chloroplastic/mitochondrial 
 bdi-r.1   100832669   glutamate--tRNA ligase, chloroplastic/mitochondrial 
 nta-r.1   107774917   glutamate--tRNA ligase, chloroplastic/mitochondrial-like 
 nta-r.1   107784556   glutamate--tRNA ligase, chloroplastic/mitochondrial 

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Top 50 coexpressed genes to CHLRE_07g313700v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_07g313700v5 (cre-r.1 coexpression data)

CoexMap"5726513"


creCHLRE_07g313700v5 | Entrez gene ID : 5726513      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 2 1 1 1 1 3 1 2 2 1 1 1 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre00860 [list] [network] Porphyrin metabolism (50 genes)
cre00970 [list] [network] Aminoacyl-tRNA biosynthesis (65 genes)
cre01240 [list] [network] Biosynthesis of cofactors (149 genes)
GO BP
GO:0006424 [list] [network] glutamyl-tRNA aminoacylation  (2 genes)  IEA  
GO CC
GO MF
GO:0004818 [list] [network] glutamate-tRNA ligase activity  (2 genes)  IEA  
GO:0000049 [list] [network] tRNA binding  (34 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (213 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1223 genes)  IEA  
Protein XP_001700965.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_001700965.2)
Subcellular
localization
TargetP
mito 8  (predict for XP_001700965.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_07g313700v5
ath-u.5
for
ERS
gma-u.5
for
100810730
gma-u.5
for
100787983
sly-u.5
for
101259201
osa-u.5
for
4328118
zma-u.5
for
103654929
zma-u.5
for
100383787
bra-r.6
for
103873823
vvi-u.5
for
100250310
ppo-u.5
for
7463354
mtr-u.5
for
25500188
tae-r.2
for
123135880
tae-r.2
for
123131902
tae-r.2
for
123143401
hvu-r.1
for
123402953
ghi-r.1
for
107928970
ghi-r.1
for
107900975
bna-r.1
for
106347958
bna-r.1
for
106347903
sbi-r.1
for
8068257
sot-r.1
for
102577502
cit-r.1
for
102612397
bdi-r.1
for
100832669
nta-r.1
for
107774917
nta-r.1
for
107784556


Ortholog ID: 9751
Species cre ath gma gma sly osa zma zma bra vvi ppo mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_07g313700v5 ERS LOC100810730 LOC100787983 LOC101259201 LOC4328118 LOC103654929 LOC100383787 LOC103873823 LOC100250310 LOC7463354 LOC25500188 LOC123135880 LOC123131902 LOC123143401 LOC123402953 LOC107928970 LOC107900975 LOC106347958 LOC106347903 LOC8068257 LOC102577502 LOC102612397 LOC100832669 LOC107774917 LOC107784556
Function* uncharacterized protein glutamate tRNA synthetase glutamate--tRNA ligase, chloroplastic/mitochondrial glutamate--tRNA ligase, chloroplastic/mitochondrial glutamate--tRNA ligase, chloroplastic/mitochondrial glutamate--tRNA ligase, chloroplastic/mitochondrial glutamate--tRNA ligase, chloroplastic/mitochondrial Glutamate--tRNA ligase chloroplastic/mitochondrial glutamate--tRNA ligase, chloroplastic/mitochondrial glutamate--tRNA ligase, chloroplastic/mitochondrial glutamate--tRNA ligase, chloroplastic/mitochondrial glutamate--tRNA ligase, chloroplastic/mitochondrial glutamate--tRNA ligase, chloroplastic/mitochondrial glutamate--tRNA ligase, chloroplastic/mitochondrial glutamate--tRNA ligase, chloroplastic/mitochondrial glutamate--tRNA ligase, chloroplastic/mitochondrial glutamate--tRNA ligase, chloroplastic/mitochondrial glutamate--tRNA ligase, chloroplastic/mitochondrial glutamate--tRNA ligase, chloroplastic/mitochondrial glutamate--tRNA ligase, chloroplastic/mitochondrial glutamate--tRNA ligase, chloroplastic/mitochondrial glutamate--tRNA ligase, chloroplastic/mitochondrial glutamate--tRNA ligase, chloroplastic/mitochondrial glutamate--tRNA ligase, chloroplastic/mitochondrial glutamate--tRNA ligase, chloroplastic/mitochondrial-like glutamate--tRNA ligase, chloroplastic/mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 10
cre01240 Biosynthesis of cofactors 6
cre00900 Terpenoid backbone biosynthesis 2
cre00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 4
ath00860 Porphyrin metabolism 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 4
gma01240 Biosynthesis of cofactors 4
gma03010 Ribosome 3
gma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 3
gma00970 Aminoacyl-tRNA biosynthesis 3
gma01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 7
osa00860 Porphyrin metabolism 3
osa01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 4
zma00450 Selenocompound metabolism 2
zma00860 Porphyrin metabolism 2
zma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 2
zma00970 Aminoacyl-tRNA biosynthesis 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 6
bra01240 Biosynthesis of cofactors 6
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 7
vvi00860 Porphyrin metabolism 6
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 8
tae01240 Biosynthesis of cofactors 6
tae00860 Porphyrin metabolism 3
tae03040 Spliceosome 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 6
tae00970 Aminoacyl-tRNA biosynthesis 5
tae00860 Porphyrin metabolism 3
tae00740 Riboflavin metabolism 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 5
tae00860 Porphyrin metabolism 4
tae00970 Aminoacyl-tRNA biosynthesis 4
tae03040 Spliceosome 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00860 Porphyrin metabolism 3
hvu01240 Biosynthesis of cofactors 3
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00940 Phenylpropanoid biosynthesis 2
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00230 Purine metabolism 2
ghi00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 9
bna01240 Biosynthesis of cofactors 9
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 9
bna01240 Biosynthesis of cofactors 9
bna00970 Aminoacyl-tRNA biosynthesis 3
bna04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 3
sbi00564 Glycerophospholipid metabolism 2
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
cit00970 Aminoacyl-tRNA biosynthesis 3
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 5
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta01230 Biosynthesis of amino acids 3
nta00290 Valine, leucine and isoleucine biosynthesis 2
nta00650 Butanoate metabolism 2
nta00660 C5-Branched dibasic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta01230 Biosynthesis of amino acids 3
nta00290 Valine, leucine and isoleucine biosynthesis 2
nta00650 Butanoate metabolism 2
nta00660 C5-Branched dibasic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5726513 836526 100810730 100787983 101259201 4328118 103654929 100383787 103873823 100250310 7463354 25500188 123135880 123131902 123143401 123402953 107928970 107900975 106347958 106347903 8068257 102577502 102612397 100832669 107774917 107784556
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