ATTED-II : GeneCoexpression result

Species	Gene	Description
cre-r.1	CHLRE_08g372000v5	uncharacterized protein
ath-u.5	AT2G21385	uncharacterized protein
gma-u.5	BFA3	chloroplast stromal protein BFA3
gma-u.5	100780966	uncharacterized LOC100780966
sly-u.5	101251520	uncharacterized LOC101251520
osa-u.5	4347667	uncharacterized LOC4347667
zma-u.5	100194108	uncharacterized LOC100194108
bra-r.6	103842533	uncharacterized LOC103842533
vvi-u.5	100247047	uncharacterized LOC100247047
ppo-u.5	7461245	uncharacterized LOC7461245
mtr-u.5	11443582	uncharacterized LOC11443582
tae-r.2	123123040	uncharacterized LOC123123040
tae-r.2	123047158	uncharacterized LOC123047158
tae-r.2	123181214	uncharacterized LOC123181214
hvu-r.1	123433209	uncharacterized LOC123433209
ghi-r.1	107944997	uncharacterized LOC107944997
ghi-r.1	107928003	uncharacterized LOC107928003
bna-r.1	106411726	uncharacterized LOC106411726
sbi-r.1	110432812	uncharacterized LOC110432812
sot-r.1	102583684	uncharacterized LOC102583684
cit-r.1	102618849	uncharacterized LOC102618849
bdi-r.1	100840747	uncharacterized LOC100840747
nta-r.1	107797670	uncharacterized LOC107797670
nta-r.1	107805060	uncharacterized LOC107805060

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_042922053.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9

(predict for XP_042922053.1)

Subcellular
localization
TargetP

chlo 8

(predict for XP_042922053.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_08g372000v5	ath-u.5 for AT2G21385	gma-u.5 for BFA3	gma-u.5 for 100780966	sly-u.5 for 101251520	osa-u.5 for 4347667	zma-u.5 for 100194108	bra-r.6 for 103842533	vvi-u.5 for 100247047	ppo-u.5 for 7461245	mtr-u.5 for 11443582	tae-r.2 for 123123040	tae-r.2 for 123047158	tae-r.2 for 123181214	hvu-r.1 for 123433209	ghi-r.1 for 107944997	ghi-r.1 for 107928003	bna-r.1 for 106411726	sbi-r.1 for 110432812	sot-r.1 for 102583684	cit-r.1 for 102618849	bdi-r.1 for 100840747	nta-r.1 for 107797670	nta-r.1 for 107805060

Ortholog

Ortholog ID: 8883

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

BFA3

Function^*

uncharacterized protein

chloroplast stromal protein BFA3

uncharacterized LOC100780966

uncharacterized LOC101251520

uncharacterized LOC4347667

uncharacterized LOC100194108

uncharacterized LOC103842533

uncharacterized LOC100247047

uncharacterized LOC7461245

uncharacterized LOC11443582

uncharacterized LOC123123040

uncharacterized LOC123047158

uncharacterized LOC123181214

uncharacterized LOC123433209

uncharacterized LOC107944997

uncharacterized LOC107928003

uncharacterized LOC106365986

uncharacterized LOC110432812

uncharacterized LOC102583684

uncharacterized LOC102618849

uncharacterized LOC100840747

uncharacterized LOC107797670

uncharacterized LOC107805060

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00970	Aminoacyl-tRNA biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00195	Photosynthesis	3
sly00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01200	Carbon metabolism	3
ppo00010	Glycolysis / Gluconeogenesis	2
ppo00030	Pentose phosphate pathway	2
ppo00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	3
tae00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	8
tae00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00970	Aminoacyl-tRNA biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	3

Expression

Expression pattern

Entrez Gene ID^*

5726859

816677

100801542

100780966

101251520

4347667

100194108

103842533

100247047

7461245

11443582

123123040

123047158

123181214

123433209

107944997

107928003

106365986

110432812

102583684

102618849

100840747

107797670

107805060

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to CHLRE_08g372000v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_08g372000v5 (cre-r.1 coexpression data)


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	1	2	1	1	1	1	1	1	1	3	1	2	1	1	1	1	1	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_08g372000v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_08g372000v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**