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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_06g293000v5   uncharacterized protein 
 ath-u.5   EMB2813   DNA primase, large subunit family 
 gma-u.5   100816023   probable DNA primase large subunit 
 gma-u.5   100806321   probable DNA primase large subunit 
 sly-u.5   101266715   probable DNA primase large subunit 
 osa-u.5   4342990   probable DNA primase large subunit 
 zma-u.5   100384853   uncharacterized LOC100384853 
 zma-u.5   100191752   putative DNA primase large subunit 
 bra-r.6   103852392   probable DNA primase large subunit 
 vvi-u.5   100244238   probable DNA primase large subunit 
 ppo-u.5   7481211   probable DNA primase large subunit 
 mtr-u.5   11439551   probable DNA primase large subunit 
 tae-r.2   123189051   probable DNA primase large subunit 
 tae-r.2   123053140   probable DNA primase large subunit 
 tae-r.2   123045303   probable DNA primase large subunit 
 hvu-r.1   123426536   probable DNA primase large subunit 
 ghi-r.1   107910013   probable DNA primase large subunit 
 ghi-r.1   107886366   probable DNA primase large subunit 
 bna-r.1   106391989   probable DNA primase large subunit 
 bna-r.1   106375627   probable DNA primase large subunit 
 sbi-r.1   8070825   probable DNA primase large subunit 
 sot-r.1   102599578   probable DNA primase large subunit 
 cit-r.1   102620839   probable DNA primase large subunit 
 bdi-r.1   100832512   probable DNA primase large subunit 
 nta-r.1   107765547   putative DNA primase large subunit 
 nta-r.1   107791516   putative DNA primase large subunit 

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Top 50 coexpressed genes to CHLRE_06g293000v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_06g293000v5 (cre-r.1 coexpression data)

CoexMap"5727120"


creCHLRE_06g293000v5 | Entrez gene ID : 5727120    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 2 1 1 1 1 3 1 2 2 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006269 [list] [network] DNA replication, synthesis of primer  (2 genes)  IEA  
GO CC
GO:0005658 [list] [network] alpha DNA polymerase:primase complex  (4 genes)  IEA  
GO MF
Protein XP_042924160.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo 2,  cyto 2,  pero 1,  cyto_nucl 1  (predict for XP_042924160.1)
Subcellular
localization
TargetP
other 6  (predict for XP_042924160.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_06g293000v5
ath-u.5
for
EMB2813
gma-u.5
for
100816023
gma-u.5
for
100806321
sly-u.5
for
101266715
osa-u.5
for
4342990
zma-u.5
for
100384853
zma-u.5
for
100191752
bra-r.6
for
103852392
vvi-u.5
for
100244238
ppo-u.5
for
7481211
mtr-u.5
for
11439551
tae-r.2
for
123189051
tae-r.2
for
123053140
tae-r.2
for
123045303
hvu-r.1
for
123426536
ghi-r.1
for
107910013
ghi-r.1
for
107886366
bna-r.1
for
106391989
bna-r.1
for
106375627
sbi-r.1
for
8070825
sot-r.1
for
102599578
cit-r.1
for
102620839
bdi-r.1
for
100832512
nta-r.1
for
107765547
nta-r.1
for
107791516


Ortholog ID: 8758
Species cre ath gma gma sly osa zma zma bra vvi ppo mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_06g293000v5 EMB2813 LOC100816023 LOC100806321 LOC101266715 LOC4342990 LOC100384853 LOC100191752 LOC103852392 LOC100244238 LOC7481211 LOC11439551 LOC123189051 LOC123053140 LOC123045303 LOC123426536 LOC107910013 LOC107886366 LOC106391989 LOC106375627 LOC8070825 LOC102599578 LOC102620839 LOC100832512 LOC107765547 LOC107791516
Function* uncharacterized protein DNA primase, large subunit family probable DNA primase large subunit probable DNA primase large subunit probable DNA primase large subunit probable DNA primase large subunit uncharacterized LOC100384853 putative DNA primase large subunit probable DNA primase large subunit probable DNA primase large subunit probable DNA primase large subunit probable DNA primase large subunit probable DNA primase large subunit probable DNA primase large subunit probable DNA primase large subunit probable DNA primase large subunit probable DNA primase large subunit probable DNA primase large subunit probable DNA primase large subunit probable DNA primase large subunit probable DNA primase large subunit probable DNA primase large subunit probable DNA primase large subunit probable DNA primase large subunit putative DNA primase large subunit putative DNA primase large subunit
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 8
cre03420 Nucleotide excision repair 2
cre03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 11
ath03420 Nucleotide excision repair 4
ath03430 Mismatch repair 4
ath03410 Base excision repair 2
ath03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 7
gma00240 Pyrimidine metabolism 4
gma01232 Nucleotide metabolism 4
gma03420 Nucleotide excision repair 2
gma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 12
gma03420 Nucleotide excision repair 3
gma03430 Mismatch repair 3
gma03440 Homologous recombination 3
gma00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 12
sly03420 Nucleotide excision repair 2
sly03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 12
osa03440 Homologous recombination 3
osa03420 Nucleotide excision repair 3
osa03430 Mismatch repair 2
osa03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 14
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 12
zma03420 Nucleotide excision repair 2
zma03430 Mismatch repair 2
zma03440 Homologous recombination 2
zma03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 10
bra03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 4
vvi03440 Homologous recombination 3
vvi03410 Base excision repair 2
vvi03420 Nucleotide excision repair 2
vvi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 7
ppo03440 Homologous recombination 4
ppo03430 Mismatch repair 3
ppo03410 Base excision repair 3
ppo03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 12
mtr03420 Nucleotide excision repair 3
mtr03430 Mismatch repair 2
mtr03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 12
tae03410 Base excision repair 2
tae03420 Nucleotide excision repair 2
tae03440 Homologous recombination 2
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 16
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 15
tae03410 Base excision repair 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03030 DNA replication 5
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 10
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi03440 Homologous recombination 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 10
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi03440 Homologous recombination 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 12
bna00230 Purine metabolism 2
bna00240 Pyrimidine metabolism 2
bna00480 Glutathione metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 9
bna00230 Purine metabolism 4
bna00240 Pyrimidine metabolism 4
bna00480 Glutathione metabolism 4
bna01232 Nucleotide metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 11
sbi03420 Nucleotide excision repair 2
sbi03430 Mismatch repair 2
sbi03440 Homologous recombination 2
sbi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 2
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5727120 843052 100816023 100806321 101266715 4342990 100384853 100191752 103852392 100244238 7481211 11439551 123189051 123053140 123045303 123426536 107910013 107886366 106391989 106375627 8070825 102599578 102620839 100832512 107765547 107791516
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