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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_02g082550v5   uncharacterized protein 
 ath-u.5   ABA1   zeaxanthin epoxidase (ZEP) (ABA1) 
 gma-u.5   ZEP   zeaxanthin epoxidase 
 gma-u.5   100778602   zeaxanthin epoxidase, chloroplastic 
 sly-u.5   ZEP   zeaxanthin epoxidase, chloroplastic 
 osa-u.5   4335984   zeaxanthin epoxidase, chloroplastic-like 
 zma-u.5   100285076   zeaxanthin epoxidase 
 zma-u.5   103641704   zeaxanthin epoxidase, chloroplastic 
 bra-r.6   103829545   zeaxanthin epoxidase, chloroplastic 
 bra-r.6   117126611   zeaxanthin epoxidase, chloroplastic 
 bra-r.6   103837729   zeaxanthin epoxidase, chloroplastic 
 vvi-u.5   100257960   zeaxanthin epoxidase, chloroplastic 
 vvi-u.5   ZEP   zeaxanthin epoxidase 
 ppo-u.5   18094985   zeaxanthin epoxidase, chloroplastic 
 ppo-u.5   7489733   zeaxanthin epoxidase, chloroplastic 
 ppo-u.5   7462609   zeaxanthin epoxidase, chloroplastic 
 mtr-u.5   11419279   zeaxanthin epoxidase, chloroplastic 
 mtr-u.5   11408584   zeaxanthin epoxidase, chloroplastic 
 mtr-u.5   120577445   zeaxanthin epoxidase, chloroplastic 
 tae-r.2   123045605   zeaxanthin epoxidase, chloroplastic 
 tae-r.2   123053443   zeaxanthin epoxidase, chloroplastic 
 tae-r.2   542878   zeaxanthin epoxidase, chloroplastic 
 hvu-r.1   123426856   zeaxanthin epoxidase, chloroplastic 
 ghi-r.1   107913245   zeaxanthin epoxidase, chloroplastic 
 ghi-r.1   107897837   zeaxanthin epoxidase, chloroplastic 
 bna-r.1   111210027   zeaxanthin epoxidase, chloroplastic 
 bna-r.1   106390346   zeaxanthin epoxidase, chloroplastic 
 bna-r.1   106358361   zeaxanthin epoxidase, chloroplastic 
 sbi-r.1   110436123   zeaxanthin epoxidase, chloroplastic 
 sot-r.1   102592281   zeaxanthin epoxidase, chloroplastic-like 
 cit-r.1   102577984   zeaxanthin epoxidase, chloroplastic 
 cit-r.1   102619293   zeaxanthin epoxidase, chloroplastic-like 
 bdi-r.1   100835175   zeaxanthin epoxidase, chloroplastic 
 nta-r.1   107763949   zeaxanthin epoxidase, chloroplastic 
 nta-r.1   107797654   zeaxanthin epoxidase, chloroplastic 

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Top 50 coexpressed genes to CHLRE_02g082550v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_02g082550v5 (cre-r.1 coexpression data)

CoexMap"5727328"


creCHLRE_02g082550v5 | Entrez gene ID : 5727328      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 2 3 2 3 3 3 1 2 3 1 1 2 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre00906 [list] [network] Carotenoid biosynthesis (13 genes)
GO BP
GO:0009688 [list] [network] abscisic acid biosynthetic process  (1 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (224 genes)  IEA  
GO:0016020 [list] [network] membrane  (1543 genes)  IEA  
GO MF
GO:0052662 [list] [network] zeaxanthin epoxidase activity  (1 genes)  IEA  
GO:0071949 [list] [network] FAD binding  (46 genes)  IEA  
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_001701701.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  chlo_mito 5,  mito 1  (predict for XP_001701701.1)
Subcellular
localization
TargetP
mito 5,  chlo 5  (predict for XP_001701701.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_02g082550v5
ath-u.5
for
ABA1
gma-u.5
for
ZEP
gma-u.5
for
100778602
sly-u.5
for
ZEP
osa-u.5
for
4335984
zma-u.5
for
100285076
zma-u.5
for
103641704
bra-r.6
for
103829545
bra-r.6
for
117126611
bra-r.6
for
103837729
vvi-u.5
for
100257960
vvi-u.5
for
ZEP
ppo-u.5
for
18094985
ppo-u.5
for
7489733
ppo-u.5
for
7462609
mtr-u.5
for
11419279
mtr-u.5
for
11408584
mtr-u.5
for
120577445
tae-r.2
for
123045605
tae-r.2
for
123053443
tae-r.2
for
542878
hvu-r.1
for
123426856
ghi-r.1
for
107913245
ghi-r.1
for
107897837
bna-r.1
for
111210027
bna-r.1
for
106390346
bna-r.1
for
106358361
sbi-r.1
for
110436123
sot-r.1
for
102592281
cit-r.1
for
102577984
cit-r.1
for
102619293
bdi-r.1
for
100835175
nta-r.1
for
107763949
nta-r.1
for
107797654


Ortholog ID: 5398
Species cre ath gma gma sly osa zma zma bra bra bra vvi vvi ppo ppo ppo mtr mtr mtr tae tae tae hvu ghi ghi bna bna bna sbi sot cit cit bdi nta nta
Symbol CHLRE_02g082550v5 ABA1 ZEP LOC100778602 ZEP LOC4335984 LOC100285076 LOC103641704 LOC103829545 LOC117126611 LOC103837729 LOC100257960 ZEP LOC18094985 LOC7489733 LOC7462609 LOC11419279 LOC11408584 LOC120577445 LOC123045605 LOC123053443 LOC542878 LOC123426856 LOC107913245 LOC107897837 LOC111210027 LOC106390346 LOC125577768 LOC110436123 LOC102592281 LOC102577984 LOC102619293 LOC100835175 LOC107763949 LOC107797654
Function* uncharacterized protein zeaxanthin epoxidase (ZEP) (ABA1) zeaxanthin epoxidase zeaxanthin epoxidase, chloroplastic zeaxanthin epoxidase, chloroplastic zeaxanthin epoxidase, chloroplastic-like zeaxanthin epoxidase zeaxanthin epoxidase, chloroplastic zeaxanthin epoxidase, chloroplastic zeaxanthin epoxidase, chloroplastic zeaxanthin epoxidase, chloroplastic zeaxanthin epoxidase, chloroplastic zeaxanthin epoxidase zeaxanthin epoxidase, chloroplastic zeaxanthin epoxidase, chloroplastic zeaxanthin epoxidase, chloroplastic zeaxanthin epoxidase, chloroplastic zeaxanthin epoxidase, chloroplastic zeaxanthin epoxidase, chloroplastic zeaxanthin epoxidase, chloroplastic zeaxanthin epoxidase, chloroplastic zeaxanthin epoxidase, chloroplastic zeaxanthin epoxidase, chloroplastic zeaxanthin epoxidase, chloroplastic zeaxanthin epoxidase, chloroplastic zeaxanthin epoxidase, chloroplastic zeaxanthin epoxidase, chloroplastic zeaxanthin epoxidase, chloroplastic-like zeaxanthin epoxidase, chloroplastic zeaxanthin epoxidase, chloroplastic-like zeaxanthin epoxidase, chloroplastic zeaxanthin epoxidase, chloroplastic-like zeaxanthin epoxidase, chloroplastic zeaxanthin epoxidase, chloroplastic zeaxanthin epoxidase, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00196 Photosynthesis - antenna proteins 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00270 Cysteine and methionine metabolism 2
gma00230 Purine metabolism 2
gma00261 Monobactam biosynthesis 2
gma00450 Selenocompound metabolism 2
gma00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00906 Carotenoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
bra00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
bra04016 MAPK signaling pathway - plant 2
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 5
vvi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00196 Photosynthesis - antenna proteins 4
vvi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 3
tae04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00906 Carotenoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00906 Carotenoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00906 Carotenoid biosynthesis 4
bna00740 Riboflavin metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00561 Glycerolipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00270 Cysteine and methionine metabolism 2
nta00350 Tyrosine metabolism 2
nta00360 Phenylalanine metabolism 2
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00270 Cysteine and methionine metabolism 2
nta00350 Tyrosine metabolism 2
nta00360 Phenylalanine metabolism 2
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5727328 836838 100800186 100778602 544162 4335984 100285076 103641704 103829545 117126611 103837729 100257960 100232944 18094985 7489733 7462609 11419279 11408584 120577445 123045605 123053443 542878 123426856 107913245 107897837 111210027 106390346 125577768 110436123 102592281 102577984 102619293 100835175 107763949 107797654
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