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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_02g082852v5   uncharacterized protein 
 cre-r.1   CHLRE_02g082750v5   uncharacterized protein 
 ath-u.5   PSBX   photosystem II subunit X 
 gma-u.5   100305487   uncharacterized LOC100305487 
 gma-u.5   100780841   uncharacterized LOC100780841 
 gma-u.5   100792794   uncharacterized LOC100792794 
 sly-u.5   101259747   uncharacterized LOC101259747 
 sly-u.5   101248456   uncharacterized LOC101248456 
 sly-u.5   101248173   uncharacterized LOC101248173 
 osa-u.5   4332805   uncharacterized LOC4332805 
 osa-u.5   9269218   uncharacterized LOC9269218 
 zma-u.5   103634849   Ultraviolet-B-repressible protein 
 zma-u.5   100281930   ultraviolet-B-repressible protein 
 bra-r.6   103833701   uncharacterized LOC103833701 
 bra-r.6   103833703   uncharacterized LOC103833703 
 bra-r.6   103828495   uncharacterized LOC103828495 
 vvi-u.5   104878987   uncharacterized LOC104878987 
 vvi-u.5   109123414   uncharacterized LOC109123414 
 ppo-u.5   7491998   uncharacterized LOC7491998 
 ppo-u.5   18100358   uncharacterized LOC18100358 
 ppo-u.5   18107703   uncharacterized LOC18107703 
 mtr-u.5   11442239   uncharacterized LOC11442239 
 mtr-u.5   11428767   uncharacterized LOC11428767 
 mtr-u.5   25486479   uncharacterized LOC25486479 
 tae-r.2   123099920   uncharacterized LOC123099920 
 tae-r.2   123043732   uncharacterized LOC123043732 
 hvu-r.1   123424754   uncharacterized LOC123424754 
 ghi-r.1   107893352   uncharacterized LOC107893352 
 ghi-r.1   107893351   uncharacterized LOC107893351 
 bna-r.1   111199190   uncharacterized LOC111199190 
 bna-r.1   106361527   uncharacterized LOC106361527 
 sbi-r.1   8078499   uncharacterized LOC8078499 
 sbi-r.1   8078539   uncharacterized LOC8078539 
 sot-r.1   102596339   uncharacterized LOC102596339 
 sot-r.1   102601302   uncharacterized LOC102601302 
 sot-r.1   102596015   uncharacterized LOC102596015 
 cit-r.1   102611151   uncharacterized LOC102611151 
 cit-r.1   102612959   uncharacterized LOC102612959 
 bdi-r.1   100834468   uncharacterized LOC100834468 
 nta-r.1   107767231   uncharacterized LOC107767231 
 nta-r.1   107769998   uncharacterized LOC107769998 

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Top 50 coexpressed genes to CHLRE_02g082852v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_02g082852v5 (cre-r.1 coexpression data)

CoexMap"5727331"


creCHLRE_02g082852v5 | Entrez gene ID : 5727331      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 2 1 3 3 2 2 3 2 3 3 2 1 2 2 2 3 2 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0015979 [list] [network] photosynthesis  (64 genes)  IEA  
GO CC
GO:0009523 [list] [network] photosystem II  (19 genes)  IEA  
GO:0016020 [list] [network] membrane  (1543 genes)  IEA  
GO MF
Protein XP_042926904.1 [sequence] [blastp]
Subcellular
localization
wolf
vacu 8,  extr 2  (predict for XP_042926904.1)
Subcellular
localization
TargetP
chlo 3  (predict for XP_042926904.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_02g082852v5
cre-r.1
for
CHLRE_02g082750v5
ath-u.5
for
PSBX
gma-u.5
for
100305487
gma-u.5
for
100780841
gma-u.5
for
100792794
sly-u.5
for
101259747
sly-u.5
for
101248456
sly-u.5
for
101248173
osa-u.5
for
4332805
osa-u.5
for
9269218
zma-u.5
for
103634849
zma-u.5
for
100281930
bra-r.6
for
103833701
bra-r.6
for
103833703
bra-r.6
for
103828495
vvi-u.5
for
104878987
vvi-u.5
for
109123414
ppo-u.5
for
7491998
ppo-u.5
for
18100358
ppo-u.5
for
18107703
mtr-u.5
for
11442239
mtr-u.5
for
11428767
mtr-u.5
for
25486479
tae-r.2
for
123099920
tae-r.2
for
123043732
hvu-r.1
for
123424754
ghi-r.1
for
107893352
ghi-r.1
for
107893351
bna-r.1
for
111199190
bna-r.1
for
106361527
sbi-r.1
for
8078499
sbi-r.1
for
8078539
sot-r.1
for
102596339
sot-r.1
for
102601302
sot-r.1
for
102596015
cit-r.1
for
102611151
cit-r.1
for
102612959
bdi-r.1
for
100834468
nta-r.1
for
107767231
nta-r.1
for
107769998


Ortholog ID: 2009
Species cre cre ath gma gma gma sly sly sly osa osa zma zma bra bra bra vvi vvi ppo ppo ppo mtr mtr mtr tae tae tae hvu ghi bna bna sbi sbi sot sot sot cit cit bdi nta nta nta
Symbol CHLRE_02g082852v5 CHLRE_02g082750v5 PSBX LOC100305487 LOC100780841 LOC100306291 LOC101248456 LOC101248173 LOC101247889 LOC4332805 LOC9269218 LOC103634849 LOC100281930 LOC103833701 LOC103833703 LOC103828495 LOC104878987 LOC109123414 LOC7491998 LOC18100358 LOC18107703 LOC11442239 LOC11428767 LOC25486479 LOC123099920 LOC123051589 LOC123187525 LOC123424754 LOC107929880 LOC106361527 LOC106418973 LOC8078499 LOC8078539 LOC102601302 LOC102596015 LOC102595674 LOC102611151 LOC102612959 LOC100834468 LOC107769998 LOC107831306 LOC107790612
Function* uncharacterized protein uncharacterized protein photosystem II subunit X uncharacterized LOC100305487 uncharacterized LOC100780841 uncharacterized LOC100306291 uncharacterized LOC101248456 uncharacterized LOC101248173 uncharacterized LOC101247889 uncharacterized LOC4332805 uncharacterized LOC9269218 Ultraviolet-B-repressible protein ultraviolet-B-repressible protein uncharacterized LOC103833701 uncharacterized LOC103833703 uncharacterized LOC103828495 uncharacterized LOC104878987 uncharacterized LOC109123414 uncharacterized LOC7491998 uncharacterized LOC18100358 uncharacterized LOC18107703 uncharacterized LOC11442239 uncharacterized LOC11428767 uncharacterized LOC25486479 uncharacterized LOC123099920 uncharacterized LOC123051589 uncharacterized LOC123187525 uncharacterized LOC123424754 uncharacterized LOC107929880 uncharacterized LOC106361527 uncharacterized LOC106418973 uncharacterized LOC8078499 uncharacterized LOC8078539 uncharacterized LOC102601302 uncharacterized LOC102596015 uncharacterized LOC102595674 uncharacterized LOC102611151 uncharacterized LOC102612959 uncharacterized LOC100834468 uncharacterized LOC107769998 uncharacterized LOC107831306 uncharacterized LOC107790612
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00195 Photosynthesis 5
cre00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00195 Photosynthesis 7
cre00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 14
ath00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 14
gma00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 12
gma00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 12
gma00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 13
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 12
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 10
sly00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 10
osa00196 Photosynthesis - antenna proteins 5
osa00630 Glyoxylate and dicarboxylate metabolism 2
osa00710 Carbon fixation by Calvin cycle 2
osa01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 11
bra00196 Photosynthesis - antenna proteins 2
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 7
bra00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 9
bra00196 Photosynthesis - antenna proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 8
vvi00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 12
vvi00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00196 Photosynthesis - antenna proteins 9
ppo00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 10
ppo00860 Porphyrin metabolism 2
ppo00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00196 Photosynthesis - antenna proteins 10
ppo00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00196 Photosynthesis - antenna proteins 6
mtr00195 Photosynthesis 4
mtr00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 4
mtr00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 5
mtr00710 Carbon fixation by Calvin cycle 4
mtr00010 Glycolysis / Gluconeogenesis 3
mtr00030 Pentose phosphate pathway 3
mtr00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 6
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 7
hvu00630 Glyoxylate and dicarboxylate metabolism 5
hvu00710 Carbon fixation by Calvin cycle 5
hvu00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 7
ghi01200 Carbon metabolism 7
ghi00710 Carbon fixation by Calvin cycle 6
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00196 Photosynthesis - antenna proteins 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00196 Photosynthesis - antenna proteins 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 9
sbi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 11
sbi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 12
sot00010 Glycolysis / Gluconeogenesis 2
sot00710 Carbon fixation by Calvin cycle 2
sot01200 Carbon metabolism 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 14
sot00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 8
sot00196 Photosynthesis - antenna proteins 5
sot00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 6
cit01200 Carbon metabolism 2
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 12
nta00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 8
nta00906 Carotenoid biosynthesis 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 12
nta00196 Photosynthesis - antenna proteins 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5727331 66052268 815210 100305487 100780841 100306291 101248456 101248173 101247889 4332805 9269218 103634849 100281930 103833701 103833703 103828495 104878987 109123414 7491998 18100358 18107703 11442239 11428767 25486479 123099920 123051589 123187525 123424754 107929880 106361527 106418973 8078499 8078539 102601302 102596015 102595674 102611151 102612959 100834468 107769998 107831306 107790612
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