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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_02g082877v5   uncharacterized protein 
 ath-u.5   SRS   Seryl-tRNA synthetase 
 gma-u.5   100809150   serine--tRNA ligase, chloroplastic/mitochondrial 
 sly-u.5   101263605   serine--tRNA ligase, chloroplastic/mitochondrial 
 osa-u.5   4350906   serine--tRNA ligase, chloroplastic/mitochondrial 
 zma-u.5   542538   seryl-tRNA synthetase 
 bra-r.6   103843218   serine--tRNA ligase, chloroplastic/mitochondrial 
 bra-r.6   103836202   serine--tRNA ligase, chloroplastic/mitochondrial 
 vvi-u.5   100261676   serine--tRNA ligase, chloroplastic/mitochondrial 
 ppo-u.5   7461791   serine--tRNA ligase, chloroplastic/mitochondrial 
 mtr-u.5   11434218   serine--tRNA ligase, chloroplastic/mitochondrial 
 tae-r.2   123120461   serine--tRNA ligase, chloroplastic/mitochondrial 
 tae-r.2   123111263   serine--tRNA ligase, chloroplastic/mitochondrial 
 tae-r.2   123103078   serine--tRNA ligase, chloroplastic/mitochondrial 
 hvu-r.1   123448544   serine--tRNA ligase, chloroplastic/mitochondrial 
 ghi-r.1   107905087   serine--tRNA ligase, chloroplastic/mitochondrial 
 ghi-r.1   107957780   serine--tRNA ligase, chloroplastic/mitochondrial 
 bna-r.1   106362173   serine--tRNA ligase, chloroplastic/mitochondrial 
 bna-r.1   106415337   serine--tRNA ligase, chloroplastic/mitochondrial 
 bna-r.1   106412010   serine--tRNA ligase, chloroplastic/mitochondrial-like 
 sbi-r.1   8074400   serine--tRNA ligase, chloroplastic/mitochondrial 
 sot-r.1   102585223   serine--tRNA ligase, chloroplastic/mitochondrial 
 cit-r.1   102619966   serine--tRNA ligase, chloroplastic/mitochondrial 
 bdi-r.1   100838732   serine--tRNA ligase, chloroplastic/mitochondrial 
 nta-r.1   107795196   serine--tRNA ligase, chloroplastic/mitochondrial 
 nta-r.1   107821468   serine--tRNA ligase, chloroplastic/mitochondrial-like 

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Top 50 coexpressed genes to CHLRE_02g082877v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_02g082877v5 (cre-r.1 coexpression data)

CoexMap"5727332"


creCHLRE_02g082877v5 | Entrez gene ID : 5727332    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 1 1 1 1 2 1 1 1 3 1 2 3 1 1 1 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0070158 [list] [network] mitochondrial seryl-tRNA aminoacylation  (2 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (441 genes)  IEA  
GO MF
GO:0004828 [list] [network] serine-tRNA ligase activity  (3 genes)  IEA  
GO:0000049 [list] [network] tRNA binding  (34 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (670 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1223 genes)  IEA  
Protein XP_042926905.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 3,  nucl 1  (predict for XP_042926905.1)
Subcellular
localization
TargetP
other 8  (predict for XP_042926905.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_02g082877v5
ath-u.5
for
SRS
gma-u.5
for
100809150
sly-u.5
for
101263605
osa-u.5
for
4350906
zma-u.5
for
542538
bra-r.6
for
103843218
bra-r.6
for
103836202
vvi-u.5
for
100261676
ppo-u.5
for
7461791
mtr-u.5
for
11434218
tae-r.2
for
123120461
tae-r.2
for
123111263
tae-r.2
for
123103078
hvu-r.1
for
123448544
ghi-r.1
for
107905087
ghi-r.1
for
107957780
bna-r.1
for
106362173
bna-r.1
for
106415337
bna-r.1
for
106412010
sbi-r.1
for
8074400
sot-r.1
for
102585223
cit-r.1
for
102619966
bdi-r.1
for
100838732
nta-r.1
for
107795196
nta-r.1
for
107821468


Ortholog ID: 9209
Species cre ath gma sly osa zma bra bra vvi ppo mtr tae tae tae hvu ghi ghi bna bna bna sbi sot cit bdi nta nta
Symbol CHLRE_02g082877v5 SRS LOC100809150 LOC101263605 LOC4350906 LOC542538 LOC103843218 LOC103836202 LOC100261676 LOC7461791 LOC11434218 LOC123120461 LOC123111263 LOC123103078 LOC123448544 LOC107905087 LOC107957780 LOC106362173 LOC106415337 LOC106413865 LOC8074400 LOC102585223 LOC102619966 LOC100838732 LOC107795196 LOC107821468
Function* uncharacterized protein Seryl-tRNA synthetase serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial seryl-tRNA synthetase serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial serine--tRNA ligase, chloroplastic/mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00561 Glycerolipid metabolism 2
gma00566 Sulfoquinovose metabolism 2
gma00970 Aminoacyl-tRNA biosynthesis 2
gma00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 3
sly00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 7
osa03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 6
bra01230 Biosynthesis of amino acids 3
bra00270 Cysteine and methionine metabolism 2
bra00300 Lysine biosynthesis 2
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00030 Pentose phosphate pathway 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 5
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 10
tae00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 5
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03060 Protein export 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi00750 Vitamin B6 metabolism 2
ghi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 11
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 4
bdi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta00230 Purine metabolism 2
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
nta00230 Purine metabolism 2
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
nta00260 Glycine, serine and threonine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5727332 837734 100809150 101263605 4350906 542538 103843218 103836202 100261676 7461791 11434218 123120461 123111263 123103078 123448544 107905087 107957780 106362173 106415337 106413865 8074400 102585223 102619966 100838732 107795196 107821468
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