ATTED-II : GeneCoexpression result

Species	Gene	Description
cre-r.1	CHLRE_02g089000v5	uncharacterized protein
ath-u.5	AT3G62450	DNA mismatch repair protein
gma-u.5	100810605	uncharacterized LOC100810605
sly-u.5	101264058	uncharacterized LOC101264058
osa-u.5	9267534	uncharacterized LOC9267534
osa-u.5	107279755	uncharacterized LOC107279755
zma-u.5	100276710	uncharacterized LOC100276710
zma-u.5	100278222	uncharacterized LOC100278222
bra-r.6	103842060	uncharacterized LOC103842060
ppo-u.5	18099053	uncharacterized LOC18099053
mtr-u.5	11430517	uncharacterized LOC11430517
tae-r.2	123111401	uncharacterized LOC123111401
ghi-r.1	107932112	uncharacterized LOC107932112
bna-r.1	BNAA09G39890D	uncharacterized BNAA09G39890D
bna-r.1	106451989	uncharacterized LOC106451989
sbi-r.1	8055495	uncharacterized LOC8055495
cit-r.1	107178383	uncharacterized LOC107178383

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_001701958.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, nucl 2, cyto 2, cyto_nucl 2

(predict for XP_001701958.2)

Subcellular
localization
TargetP

scret 9, other 3

(predict for XP_001701958.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_02g089000v5	ath-u.5 for AT3G62450	gma-u.5 for 100810605	sly-u.5 for 101264058	osa-u.5 for 9267534	osa-u.5 for 107279755	zma-u.5 for 100276710	zma-u.5 for 100278222	bra-r.6 for 103842060	ppo-u.5 for 18099053	mtr-u.5 for 11430517	tae-r.2 for 123111401	ghi-r.1 for 107932112	bna-r.1 for BNAA09G39890D	bna-r.1 for 106451989	sbi-r.1 for 8055495	cit-r.1 for 107178383

Ortholog

Ortholog ID: 12911

Species

cre

ath

gma

sly

osa

zma

bra

ppo

mtr

tae

ghi

bna

sbi

cit

Symbol

Function^*

uncharacterized protein

DNA mismatch repair protein

uncharacterized LOC100810605

uncharacterized LOC101264058

uncharacterized LOC9267534

uncharacterized LOC107279755

uncharacterized LOC100276710

uncharacterized LOC100278222

uncharacterized LOC103842060

uncharacterized LOC18099053

uncharacterized LOC11430517

uncharacterized LOC123111401

uncharacterized LOC107932112

uncharacterized BNAA09G39890D

uncharacterized LOC106451989

uncharacterized LOC8055495

uncharacterized LOC107178383

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	4
gma03022	Basal transcription factors	2
gma03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03060	Protein export	5
sly03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03013	Nucleocytoplasmic transport	2
ppo04120	Ubiquitin mediated proteolysis	2
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	12
mtr00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	4
ghi03060	Protein export	2
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	4
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	4
sbi03420	Nucleotide excision repair	3
sbi03020	RNA polymerase	2
sbi03040	Spliceosome	2
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	2
cit03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

5727446

825418

100810605

101264058

9267534

107279755

100276710

100278222

103842060

18099053

11430517

123111401

107932112

106368521

106451989

8055495

107178383

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to CHLRE_02g089000v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_02g089000v5 (cre-r.1 coexpression data)


Species	cre	ath	gma	sly	osa	zma	bra	ppo	mtr	tae	ghi	bna	sbi	cit	sot	hvu	vvi	nta	bdi
Paralog	1	1	1	1	2	2	1	1	1	1	1	2	1	1	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_02g089000v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_02g089000v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**