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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g498350v5   uncharacterized protein 
 ath-u.5   AT4G36980   CLK4-associating serine/arginine-rich protein 
 gma-u.5   100792600   CLK4-associating serine/arginine rich protein 
 gma-u.5   100779007   CLK4-associating serine/arginine rich protein 
 sly-u.5   101243842   uncharacterized LOC101243842 
 osa-u.5   9268882   uncharacterized LOC9268882 
 zma-u.5   100279962   Splicing factor arginine/serine-rich 
 bra-r.6   103862710   CLK4-associating serine/arginine rich protein 
 vvi-u.5   100267903   uncharacterized LOC100267903 
 ppo-u.5   7476382   uncharacterized LOC7476382 
 ppo-u.5   7462611   uncharacterized LOC7462611 
 mtr-u.5   11426280   CLK4-associating serine/arginine rich protein 
 tae-r.2   123096996   CLK4-associating serine/arginine rich protein 
 tae-r.2   123092129   CLK4-associating serine/arginine rich protein 
 tae-r.2   123085933   CLK4-associating serine/arginine rich protein 
 hvu-r.1   123448523   CLK4-associating serine/arginine rich protein 
 ghi-r.1   107897746   CLK4-associating serine/arginine rich protein 
 ghi-r.1   107909325   CLK4-associating serine/arginine rich protein 
 ghi-r.1   107913250   CLK4-associating serine/arginine rich protein 
 bna-r.1   111202025   CLK4-associating serine/arginine rich protein 
 bna-r.1   106438848   CLK4-associating serine/arginine rich protein 
 sbi-r.1   110429796   CLK4-associating serine/arginine rich protein 
 sot-r.1   102593294   CLK4-associating serine/arginine rich protein 
 cit-r.1   102621722   uncharacterized LOC102621722 
 bdi-r.1   100842983   CLK4-associating serine/arginine rich protein 
 nta-r.1   107829498   uncharacterized LOC107829498 
 nta-r.1   107763951   uncharacterized LOC107763951 

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Top 50 coexpressed genes to CHLRE_12g498350v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g498350v5 (cre-r.1 coexpression data)

CoexMap"5727922"


creCHLRE_12g498350v5 | Entrez gene ID : 5727922    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 1 1 1 2 1 3 1 3 2 1 1 1 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_042918326.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_042918326.1)
Subcellular
localization
TargetP
other 6,  mito 4  (predict for XP_042918326.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g498350v5
ath-u.5
for
AT4G36980
gma-u.5
for
100792600
gma-u.5
for
100779007
sly-u.5
for
101243842
osa-u.5
for
9268882
zma-u.5
for
100279962
bra-r.6
for
103862710
vvi-u.5
for
100267903
ppo-u.5
for
7476382
ppo-u.5
for
7462611
mtr-u.5
for
11426280
tae-r.2
for
123096996
tae-r.2
for
123092129
tae-r.2
for
123085933
hvu-r.1
for
123448523
ghi-r.1
for
107897746
ghi-r.1
for
107909325
ghi-r.1
for
107913250
bna-r.1
for
111202025
bna-r.1
for
106438848
sbi-r.1
for
110429796
sot-r.1
for
102593294
cit-r.1
for
102621722
bdi-r.1
for
100842983
nta-r.1
for
107829498
nta-r.1
for
107763951


Ortholog ID: 8576
Species cre ath gma gma sly osa zma bra vvi ppo ppo mtr tae tae tae hvu ghi ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_12g498350v5 AT4G36980 LOC100792600 LOC100779007 LOC101243842 LOC9268882 LOC100279962 LOC103862710 LOC100267903 LOC7476382 LOC7462611 LOC11426280 LOC123096996 LOC123092129 LOC123085933 LOC123448523 LOC107897746 LOC107913250 LOC107931682 LOC111202025 LOC106438848 LOC110429796 LOC102593294 LOC102621722 LOC100842983 LOC107829498 LOC107763951
Function* uncharacterized protein CLK4-associating serine/arginine-rich protein CLK4-associating serine/arginine rich protein CLK4-associating serine/arginine rich protein uncharacterized LOC101243842 uncharacterized LOC9268882 Splicing factor arginine/serine-rich CLK4-associating serine/arginine rich protein uncharacterized LOC100267903 uncharacterized LOC7476382 uncharacterized LOC7462611 CLK4-associating serine/arginine rich protein CLK4-associating serine/arginine rich protein CLK4-associating serine/arginine rich protein CLK4-associating serine/arginine rich protein CLK4-associating serine/arginine rich protein CLK4-associating serine/arginine rich protein CLK4-associating serine/arginine rich protein CLK4-associating serine/arginine rich protein CLK4-associating serine/arginine rich protein CLK4-associating serine/arginine rich protein CLK4-associating serine/arginine rich protein CLK4-associating serine/arginine rich protein uncharacterized LOC102621722 CLK4-associating serine/arginine rich protein uncharacterized LOC107829498 uncharacterized LOC107763951
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr00564 Glycerophospholipid metabolism 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04712 Circadian rhythm - plant 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 5
cit03013 Nucleocytoplasmic transport 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5727922 829852 100792600 100779007 101243842 9268882 100279962 103862710 100267903 7476382 7462611 11426280 123096996 123092129 123085933 123448523 107897746 107913250 107931682 111202025 106438848 110429796 102593294 102621722 100842983 107829498 107763951
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