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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g498250v5   ribosomal protein S17 
 ath-u.5   AT2G04390   Ribosomal S17 family protein 
 ath-u.5   AT2G05220   Ribosomal S17 family protein 
 ath-u.5   AT3G10610   Ribosomal S17 family protein 
 gma-u.5   100500063   40S ribosomal protein S17-4 
 gma-u.5   100785402   40S ribosomal protein S17 
 gma-u.5   100527036   40S ribosomal protein S17 
 sly-u.5   RPS17   40S ribosomal protein S17 
 sly-u.5   101252341   small ribosomal subunit protein eS17 
 sly-u.5   101262068   small ribosomal subunit protein eS17 
 osa-u.5   4348608   small ribosomal subunit protein eS17x 
 osa-u.5   4331346   small ribosomal subunit protein eS17x 
 zma-u.5   100194345   40S ribosomal protein S17-like 
 zma-u.5   100282953   40S ribosomal protein S17-like 
 bra-r.6   103855666   40S ribosomal protein S17-4 
 bra-r.6   103847265   40S ribosomal protein S17-4 
 bra-r.6   103870447   40S ribosomal protein S17-3 
 vvi-u.5   100256195   small ribosomal subunit protein eS17 
 vvi-u.5   100243000   40S ribosomal protein S17-like 
 ppo-u.5   7486888   40S ribosomal protein S17-4 
 ppo-u.5   7491613   40S ribosomal protein S17-4 
 mtr-u.5   120577666   40S ribosomal protein S17 
 mtr-u.5   120577680   40S ribosomal protein S17 
 mtr-u.5   120577681   40S ribosomal protein S17 
 tae-r.2   123121722   40S ribosomal protein S17-4 
 tae-r.2   123046228   40S ribosomal protein S17-4 
 tae-r.2   123181103   40S ribosomal protein S17-3 
 hvu-r.1   123431435   40S ribosomal protein S17-3-like 
 ghi-r.1   107897562   40S ribosomal protein S17 
 ghi-r.1   107897916   40S ribosomal protein S17 
 ghi-r.1   107926034   40S ribosomal protein S17 
 bna-r.1   111203884   40S ribosomal protein S17-4 
 bna-r.1   111201515   40S ribosomal protein S17-4 
 bna-r.1   106345564   40S ribosomal protein S17-3-like 
 sbi-r.1   8077316   40S ribosomal protein S17-3 
 sot-r.1   102577445   40S ribosomal protein S17-like protein 
 sot-r.1   102583185   40S ribosomal protein S17 
 sot-r.1   102581235   40S ribosomal protein S17-like 
 cit-r.1   102612785   40S ribosomal protein S17 
 cit-r.1   102627092   40S ribosomal protein S17-3 
 bdi-r.1   100846322   40S ribosomal protein S17-2 
 nta-r.1   107775156   small ribosomal subunit protein eS17 
 nta-r.1   107779419   small ribosomal subunit protein eS17-like 
 nta-r.1   107784437   small ribosomal subunit protein eS17-like 

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Top 50 coexpressed genes to CHLRE_12g498250v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g498250v5 (cre-r.1 coexpression data)

CoexMap"5727924"


creCHLRE_12g498250v5 | Entrez gene ID : 5727924      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 3 3 3 2 2 3 2 2 3 3 1 3 3 1 3 2 1 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03010 [list] [network] Ribosome (149 genes)
GO BP
GO:0006412 [list] [network] translation  (268 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (168 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (164 genes)  IEA  
Protein XP_001702348.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  cyto 3,  cyto_nucl 2,  chlo 1  (predict for XP_001702348.1)
Subcellular
localization
TargetP
other 5,  mito 5  (predict for XP_001702348.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g498250v5
ath-u.5
for
AT2G04390
ath-u.5
for
AT2G05220
ath-u.5
for
AT3G10610
gma-u.5
for
100500063
gma-u.5
for
100785402
gma-u.5
for
100527036
sly-u.5
for
RPS17
sly-u.5
for
101252341
sly-u.5
for
101262068
osa-u.5
for
4348608
osa-u.5
for
4331346
zma-u.5
for
100194345
zma-u.5
for
100282953
bra-r.6
for
103855666
bra-r.6
for
103847265
bra-r.6
for
103870447
vvi-u.5
for
100256195
vvi-u.5
for
100243000
ppo-u.5
for
7486888
ppo-u.5
for
7491613
mtr-u.5
for
120577666
mtr-u.5
for
120577680
mtr-u.5
for
120577681
tae-r.2
for
123121722
tae-r.2
for
123046228
tae-r.2
for
123181103
hvu-r.1
for
123431435
ghi-r.1
for
107897562
ghi-r.1
for
107897916
ghi-r.1
for
107926034
bna-r.1
for
111203884
bna-r.1
for
111201515
bna-r.1
for
106345564
sbi-r.1
for
8077316
sot-r.1
for
102577445
sot-r.1
for
102583185
sot-r.1
for
102581235
cit-r.1
for
102612785
cit-r.1
for
102627092
bdi-r.1
for
100846322
nta-r.1
for
107775156
nta-r.1
for
107779419
nta-r.1
for
107784437


Ortholog ID: 2121
Species cre ath ath ath gma gma gma sly sly sly osa osa zma zma bra bra bra vvi vvi ppo ppo mtr mtr mtr tae tae tae hvu ghi ghi ghi bna bna bna sbi sot sot sot cit cit bdi nta nta nta
Symbol CHLRE_12g498250v5 AT2G04390 AT3G10610 AT5G04800 LOC100500063 LOC100527036 LOC100819067 RPS17 LOC101252341 LOC101262068 LOC4348608 LOC4331346 LOC100194345 LOC100282953 LOC103855666 LOC103847265 LOC103850560 LOC100256195 LOC100243000 LOC7486888 LOC7491613 LOC120577666 LOC120577680 LOC120577681 LOC123121722 LOC123046228 LOC123181103 LOC123431435 LOC107897916 LOC107926034 LOC107892259 LOC111203884 LOC106345564 LOC106428248 LOC8077316 LOC102577445 LOC102583185 LOC102581235 LOC102612785 LOC102627092 LOC100846322 LOC107775156 LOC107779419 LOC107761505
Function* ribosomal protein S17 Ribosomal S17 family protein Ribosomal S17 family protein Ribosomal S17 family protein 40S ribosomal protein S17-4 40S ribosomal protein S17 40S ribosomal protein S17 40S ribosomal protein S17 small ribosomal subunit protein eS17 small ribosomal subunit protein eS17 small ribosomal subunit protein eS17x small ribosomal subunit protein eS17x 40S ribosomal protein S17-like 40S ribosomal protein S17-like 40S ribosomal protein S17-4 40S ribosomal protein S17-4 40S ribosomal protein S17-4 small ribosomal subunit protein eS17 40S ribosomal protein S17-like 40S ribosomal protein S17-4 40S ribosomal protein S17-4 40S ribosomal protein S17 40S ribosomal protein S17 40S ribosomal protein S17 40S ribosomal protein S17-4 40S ribosomal protein S17-4 40S ribosomal protein S17-3 40S ribosomal protein S17-3-like 40S ribosomal protein S17 40S ribosomal protein S17 40S ribosomal protein S17 40S ribosomal protein S17-4 40S ribosomal protein S17-3-like 40S ribosomal protein S17-2 40S ribosomal protein S17-3 40S ribosomal protein S17-like protein 40S ribosomal protein S17 40S ribosomal protein S17-like 40S ribosomal protein S17 40S ribosomal protein S17-3 40S ribosomal protein S17-2 small ribosomal subunit protein eS17 small ribosomal subunit protein eS17-like small ribosomal subunit protein eS17-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 16
ath01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
gma04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
bra03013 Nucleocytoplasmic transport 3
bra03250 Viral life cycle - HIV-1 3
bra03420 Nucleotide excision repair 2
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 13
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 16
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 18
ghi04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 16
bna04120 Ubiquitin mediated proteolysis 5
bna03030 DNA replication 2
bna03420 Nucleotide excision repair 2
bna03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 20
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 10
sot03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
nta03013 Nucleocytoplasmic transport 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5727924 814978 820230 830359 100500063 100527036 100819067 544221 101252341 101262068 4348608 4331346 100194345 100282953 103855666 103847265 103850560 100256195 100243000 7486888 7491613 120577666 120577680 120577681 123121722 123046228 123181103 123431435 107897916 107926034 107892259 111203884 106345564 106428248 8077316 102577445 102583185 102581235 102612785 102627092 100846322 107775156 107779419 107761505
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