ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cre-r.1	CHLRE_10g430501v5	uncharacterized protein
ath-u.5	Phox1	Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein
ath-u.5	Phox4	Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein
ath-u.5	Phox2	Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein
gma-u.5	100784987	protein CLMP1
gma-u.5	100778972	protein PHOX1
gma-u.5	100786963	protein CLMP1
sly-u.5	101266244	protein PHOX4
sly-u.5	101256392	protein PHOX1
osa-u.5	4345203	HSP-interacting protein
osa-u.5	4346468	protein CLMP1
osa-u.5	4347818	protein PHOX1
zma-u.5	103633129	Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein
zma-u.5	103630218	protein PHOX1
zma-u.5	103641203	Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein
bra-r.6	103858363	protein PHOX1
bra-r.6	103872047	protein CLMP1
vvi-u.5	104880475	protein CLMP1
vvi-u.5	104878568	protein CLMP1-like
ppo-u.5	7484328	protein CLMP1
ppo-u.5	7458390	protein PHOX1
ppo-u.5	18097293	protein CLMP1
mtr-u.5	11446423	protein CLMP1
mtr-u.5	25488362	protein PHOX1
tae-r.2	123111532	protein CLMP1
tae-r.2	123113058	protein PHOX1
tae-r.2	123122578	protein PHOX1
hvu-r.1	123453060	protein CLMP1
hvu-r.1	123451936	protein PHOX1-like
ghi-r.1	107888404	protein PHOX1
ghi-r.1	107893452	protein PHOX1
ghi-r.1	107895163	protein CLMP1
bna-r.1	106407658	protein PHOX4-like
sbi-r.1	8077245	protein PHOX1
sbi-r.1	8069674	HSP-interacting protein
sbi-r.1	8061355	protein CLMP1
sot-r.1	102602390	uncharacterized LOC102602390
sot-r.1	102583348	uncharacterized LOC102583348
sot-r.1	102599124	uncharacterized LOC102599124
cit-r.1	102608895	protein PHOX1
cit-r.1	102611248	hypothetical protein
cit-r.1	102611694	hypothetical protein
bdi-r.1	100821725	HSP-interacting protein
bdi-r.1	100829655	protein CLMP1
bdi-r.1	100836088	protein PHOX1
nta-r.1	107759086	protein PHOX1-like
nta-r.1	107765033	protein PHOX1

Top 50 coexpressed genes to CHLRE_10g430501v5 (cre-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to CHLRE_10g430501v5 (cre-r.1 coexpression data)

CoexMap"5728091"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(1927 genes)

IEA

Protein

XP_042920033.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, mito 2, cyto 1, nucl 1, cyto_mito 1, nucl_plas 1, cyto_E.R. 1

(predict for XP_042920033.1)

Subcellular
localization
TargetP

other 7

(predict for XP_042920033.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_10g430501v5	ath-u.5 for Phox1	ath-u.5 for Phox4	ath-u.5 for Phox2	gma-u.5 for 100784987	gma-u.5 for 100778972	gma-u.5 for 100786963	sly-u.5 for 101266244	sly-u.5 for 101256392	osa-u.5 for 4345203	osa-u.5 for 4346468	osa-u.5 for 4347818	zma-u.5 for 103633129	zma-u.5 for 103630218	zma-u.5 for 103641203	bra-r.6 for 103858363	bra-r.6 for 103872047	vvi-u.5 for 104880475	vvi-u.5 for 104878568	ppo-u.5 for 7484328	ppo-u.5 for 7458390	ppo-u.5 for 18097293	mtr-u.5 for 11446423	mtr-u.5 for 25488362	tae-r.2 for 123111532	tae-r.2 for 123113058	tae-r.2 for 123122578	hvu-r.1 for 123453060	hvu-r.1 for 123451936	ghi-r.1 for 107888404	ghi-r.1 for 107893452	ghi-r.1 for 107895163	bna-r.1 for 106407658	sbi-r.1 for 8077245	sbi-r.1 for 8069674	sbi-r.1 for 8061355	sot-r.1 for 102602390	sot-r.1 for 102583348	sot-r.1 for 102599124	cit-r.1 for 102608895	cit-r.1 for 102611248	cit-r.1 for 102611694	bdi-r.1 for 100821725	bdi-r.1 for 100829655	bdi-r.1 for 100836088	nta-r.1 for 107759086	nta-r.1 for 107765033

Ortholog

Ortholog ID: 978

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

CHLRE_10g430501v5

Phox1

Phox4

Phox2

Function^*

uncharacterized protein

Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein

protein CLMP1

protein PHOX1

protein PHOX4

Hop-interacting protein THI142

HSP-interacting protein

protein CLMP1

protein PHOX1

Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein

uncharacterized LOC100191388

protein CLMP1

protein PHOX4

protein CLMP1

protein PHOX4

protein PHOX1

protein CLMP1

protein PHOX1

protein CLMP1

protein PHOX1

protein CLMP1

protein PHOX1-like

protein PHOX1

protein CLMP1

protein CLMP1-like

protein PHOX4-like

protein CLMP1-like

protein PHOX1

HSP-interacting protein

protein CLMP1

uncharacterized LOC102583348

uncharacterized LOC102585150

uncharacterized LOC102581551

protein PHOX1

hypothetical protein

HSP-interacting protein

protein CLMP1

protein PHOX1

protein PHOX1-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre01230	Biosynthesis of amino acids	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03018	RNA degradation	3
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	3
gma00230	Purine metabolism	2
gma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03013	Nucleocytoplasmic transport	5
sly03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3
bra00230	Purine metabolism	2
bra01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03013	Nucleocytoplasmic transport	3
vvi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr02010	ABC transporters	4
mtr04141	Protein processing in endoplasmic reticulum	3
mtr04626	Plant-pathogen interaction	2
mtr04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03060	Protein export	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	3
tae03060	Protein export	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00970	Aminoacyl-tRNA biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00061	Fatty acid biosynthesis	2
hvu01212	Fatty acid metabolism	2
hvu00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00860	Porphyrin metabolism	9
bna01240	Biosynthesis of cofactors	9
bna00970	Aminoacyl-tRNA biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00860	Porphyrin metabolism	9
bna01240	Biosynthesis of cofactors	9
bna00970	Aminoacyl-tRNA biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	4
sbi04016	MAPK signaling pathway - plant	3
sbi00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	3
sbi04626	Plant-pathogen interaction	3
sbi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00970	Aminoacyl-tRNA biosynthesis	3
sot03013	Nucleocytoplasmic transport	3
sot03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	2
bdi04141	Protein processing in endoplasmic reticulum	2
bdi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04814	Motor proteins	2
bdi03083	Polycomb repressive complex	2
bdi03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00562	Inositol phosphate metabolism	6
nta04070	Phosphatidylinositol signaling system	4
nta04145	Phagosome	4
nta04075	Plant hormone signal transduction	4
nta04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00562	Inositol phosphate metabolism	6
nta04070	Phosphatidylinositol signaling system	4
nta04145	Phagosome	4
nta04075	Plant hormone signal transduction	4
nta04626	Plant-pathogen interaction	4

Expression

Expression pattern

Entrez Gene ID^*

5728091

817067

829338

842537

100784987

100786963

100820306

101266244

101055540

4345203

4346468

4347818

103630218

103641203

100191388

103872047

103862108

103851302

104880475

100252640

7458390

18097293

18111051

11446423

25481929

123113058

123104773

123103329

123453060

123451936

107888404

107918086

107920161

106376256

125609237

106450743

8077245

8069674

8061355

102583348

102585150

102581551

102608895

102611248

102611694

100821725

100829655

100836088

107765033

107818589

The preparation time of this page was 0.4 [sec].


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	3	3	2	3	3	2	2	3	2	3	2	3	1	3	3	3	3	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_10g430501v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_10g430501v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**