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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_10g428900v5   uncharacterized protein 
 ath-u.5   AT3G25470   bacterial hemolysin-like protein 
 gma-u.5   100787456   putative rRNA methyltransferase YqxC 
 gma-u.5   100781303   hemolysin A 
 sly-u.5   101262851   uncharacterized LOC101262851 
 osa-u.5   4350198   uncharacterized LOC4350198 
 zma-u.5   100285994   uncharacterized LOC100285994 
 bra-r.6   103860281   putative rRNA methyltransferase YqxC 
 bra-r.6   103828554   putative rRNA methyltransferase YqxC 
 vvi-u.5   100254915   uncharacterized LOC100254915 
 ppo-u.5   7469370   uncharacterized LOC7469370 
 mtr-u.5   25500208   putative rRNA methyltransferase YqxC 
 tae-r.2   123086774   hemolysin A 
 tae-r.2   123091205   hemolysin A 
 hvu-r.1   123447827   hemolysin A 
 ghi-r.1   107922968   16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA 
 ghi-r.1   107912506   hemolysin A 
 bna-r.1   106361812   putative rRNA methyltransferase YqxC 
 bna-r.1   106366678   putative rRNA methyltransferase YqxC 
 bna-r.1   106403013   putative rRNA methyltransferase YqxC 
 sbi-r.1   8069504   hemolysin A 
 sbi-r.1   8076904   hemolysin A 
 sot-r.1   102586967   putative rRNA methyltransferase YqxC 
 cit-r.1   102609926   uncharacterized LOC102609926 
 bdi-r.1   100844113   hemolysin A 
 nta-r.1   107824951   uncharacterized LOC107824951 
 nta-r.1   107777441   uncharacterized LOC107777441 

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Top 50 coexpressed genes to CHLRE_10g428900v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_10g428900v5 (cre-r.1 coexpression data)

CoexMap"5728127"


creCHLRE_10g428900v5 | Entrez gene ID : 5728127      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 1 2 1 1 1 2 1 2 3 2 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032259 [list] [network] methylation  (124 genes)  IEA  
GO CC
GO MF
GO:0008168 [list] [network] methyltransferase activity  (194 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (670 genes)  IEA  
Protein XP_001702702.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 1,  plas 1,  vacu 1,  mito_plas 1  (predict for XP_001702702.1)
Subcellular
localization
TargetP
mito 5,  other 4  (predict for XP_001702702.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_10g428900v5
ath-u.5
for
AT3G25470
gma-u.5
for
100787456
gma-u.5
for
100781303
sly-u.5
for
101262851
osa-u.5
for
4350198
zma-u.5
for
100285994
bra-r.6
for
103860281
bra-r.6
for
103828554
vvi-u.5
for
100254915
ppo-u.5
for
7469370
mtr-u.5
for
25500208
tae-r.2
for
123086774
tae-r.2
for
123091205
hvu-r.1
for
123447827
ghi-r.1
for
107922968
ghi-r.1
for
107912506
bna-r.1
for
106361812
bna-r.1
for
106366678
bna-r.1
for
106403013
sbi-r.1
for
8069504
sbi-r.1
for
8076904
sot-r.1
for
102586967
cit-r.1
for
102609926
bdi-r.1
for
100844113
nta-r.1
for
107824951
nta-r.1
for
107777441


Ortholog ID: 8483
Species cre ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna bna sbi sbi sot cit bdi nta nta
Symbol CHLRE_10g428900v5 AT3G25470 LOC100787456 LOC100781303 LOC101262851 LOC4350198 LOC100285994 LOC103860281 LOC103828554 LOC100254915 LOC7469370 LOC25500208 LOC123086774 LOC123091205 LOC123447827 LOC107922968 LOC107912506 LOC106361812 LOC106403013 LOC106435917 LOC8069504 LOC8076904 LOC102586967 LOC102609926 LOC100844113 LOC107824951 LOC107777441
Function* uncharacterized protein bacterial hemolysin-like protein putative rRNA methyltransferase YqxC hemolysin A uncharacterized LOC101262851 uncharacterized LOC4350198 uncharacterized LOC100285994 putative rRNA methyltransferase YqxC putative rRNA methyltransferase YqxC uncharacterized LOC100254915 uncharacterized LOC7469370 putative rRNA methyltransferase YqxC hemolysin A hemolysin A hemolysin A 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA hemolysin A putative rRNA methyltransferase YqxC putative rRNA methyltransferase YqxC putative rRNA methyltransferase YqxC hemolysin A hemolysin A putative rRNA methyltransferase YqxC uncharacterized LOC102609926 hemolysin A uncharacterized LOC107824951 uncharacterized LOC107777441
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 2
gma00030 Pentose phosphate pathway 2
gma00230 Purine metabolism 2
gma01200 Carbon metabolism 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 3
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae02010 ABC transporters 3
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00510 N-Glycan biosynthesis 3
nta00513 Various types of N-glycan biosynthesis 3
nta03082 ATP-dependent chromatin remodeling 2
nta04141 Protein processing in endoplasmic reticulum 2
nta03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03040 Spliceosome 2
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5728127 822131 100787456 100781303 101262851 4350198 100285994 103860281 103828554 100254915 7469370 25500208 123086774 123091205 123447827 107922968 107912506 106361812 106403013 106435917 8069504 8076904 102586967 102609926 100844113 107824951 107777441
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