ATTED-II : GeneCoexpression result

Species	Gene	Description
cre-r.1	CHLRE_10g423950v5	uncharacterized protein
ath-u.5	AT1G79985	structural molecules protein
gma-u.5	100783390	protein SYS1 homolog
gma-u.5	100817072	protein SYS1 homolog
sly-u.5	101249162	uncharacterized LOC101249162
osa-u.5	4326384	uncharacterized LOC4326384
zma-u.5	100193049	protein SYS1
bra-r.6	103853286	protein SYS1 homolog
vvi-u.5	100244681	uncharacterized LOC100244681
ppo-u.5	7478387	uncharacterized LOC7478387
ppo-u.5	7486643	uncharacterized LOC7486643
mtr-u.5	120580918	protein SYS1 homolog
mtr-u.5	25491388	protein SYS1 homolog
tae-r.2	123070038	protein SYS1 homolog
tae-r.2	123061395	protein SYS1 homolog
tae-r.2	123078494	protein SYS1 homolog
hvu-r.1	123443809	protein SYS1 homolog
ghi-r.1	107897247	protein SYS1 homolog
ghi-r.1	107941094	protein SYS1 homolog
ghi-r.1	107913938	protein SYS1 homolog
bna-r.1	106351027	protein SYS1 homolog
bna-r.1	106353352	protein SYS1 homolog
bna-r.1	106390463	protein SYS1 homolog
sbi-r.1	8082474	protein SYS1 homolog
sot-r.1	102602819	protein SYS1 homolog
sot-r.1	102603350	protein SYS1 homolog
cit-r.1	102621314	uncharacterized LOC102621314
bdi-r.1	100833693	protein SYS1 homolog
nta-r.1	107775272	uncharacterized LOC107775272
nta-r.1	107816044	uncharacterized LOC107816044
nta-r.1	107824159	uncharacterized LOC107824159

Annotation

functional annotation

KEGG

GO BP

GO:0006895 [list] [network] Golgi to endosome transport	(1 genes)	IEA
GO:0043001 [list] [network] Golgi to plasma membrane protein transport	(4 genes)	IEA
GO:0034067 [list] [network] protein localization to Golgi apparatus	(6 genes)	IEA

GO CC

GO:0005802 [list] [network] trans-Golgi network	(29 genes)	IEA
GO:0000139 [list] [network] Golgi membrane	(38 genes)	IEA

GO MF

Protein

XP_042919919.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, nucl 1, plas 1, E.R. 1, nucl_plas 1, E.R._plas 1

(predict for XP_042919919.1)

Subcellular
localization
TargetP

scret 7

(predict for XP_042919919.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_10g423950v5	ath-u.5 for AT1G79985	gma-u.5 for 100783390	gma-u.5 for 100817072	sly-u.5 for 101249162	osa-u.5 for 4326384	zma-u.5 for 100193049	bra-r.6 for 103853286	vvi-u.5 for 100244681	ppo-u.5 for 7478387	ppo-u.5 for 7486643	mtr-u.5 for 120580918	mtr-u.5 for 25491388	tae-r.2 for 123070038	tae-r.2 for 123061395	tae-r.2 for 123078494	hvu-r.1 for 123443809	ghi-r.1 for 107897247	ghi-r.1 for 107941094	ghi-r.1 for 107913938	bna-r.1 for 106351027	bna-r.1 for 106353352	bna-r.1 for 106390463	sbi-r.1 for 8082474	sot-r.1 for 102602819	sot-r.1 for 102603350	cit-r.1 for 102621314	bdi-r.1 for 100833693	nta-r.1 for 107775272	nta-r.1 for 107816044	nta-r.1 for 107824159

Ortholog

Ortholog ID: 5921

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

Function^*

uncharacterized protein

structural molecules protein

protein SYS1 homolog

uncharacterized LOC101249162

uncharacterized LOC4326384

protein SYS1

protein SYS1 homolog

uncharacterized LOC100244681

uncharacterized LOC7478387

uncharacterized LOC7486643

protein SYS1 homolog

uncharacterized LOC102621314

protein SYS1 homolog

uncharacterized LOC107775272

uncharacterized LOC107816044

uncharacterized LOC107824159

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	3
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00440	Phosphonate and phosphinate metabolism	2
gma00564	Glycerophospholipid metabolism	2
gma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04142	Lysosome	2
sly04145	Phagosome	2
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04145	Phagosome	4
zma04144	Endocytosis	3
zma00600	Sphingolipid metabolism	2
zma04148	Efferocytosis	2
zma04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03015	mRNA surveillance pathway	2
vvi04136	Autophagy - other	2
vvi04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	4
ppo04517	IgSF CAM signaling	2
ppo05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	3
tae00564	Glycerophospholipid metabolism	2
tae00565	Ether lipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	2
tae00564	Glycerophospholipid metabolism	2
tae00565	Ether lipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03050	Proteasome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00051	Fructose and mannose metabolism	2
ghi00052	Galactose metabolism	2
ghi00500	Starch and sucrose metabolism	2
ghi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00051	Fructose and mannose metabolism	2
ghi00052	Galactose metabolism	2
ghi00500	Starch and sucrose metabolism	2
ghi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	2
sot00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00510	N-Glycan biosynthesis	2
bdi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04820	Cytoskeleton in muscle cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

5728219

28717438

100783390

100817072

101249162

4326384

100193049

103853286

100244681

7478387

7486643

120580918

25491388

123070038

123061395

123078494

123443809

107897247

107913938

107906505

106351027

106353352

106390463

8082474

102602819

102603350

102621314

100833693

107775272

107816044

107824159

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to CHLRE_10g423950v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_10g423950v5 (cre-r.1 coexpression data)


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	1	2	1	1	1	1	1	2	2	3	1	3	3	1	2	1	1	3

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_10g423950v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_10g423950v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**