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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_10g420900v5   uncharacterized protein 
 ath-u.5   AT4G16630   DEA(D/H)-box RNA helicase family protein 
 gma-u.5   100791233   DEAD-box ATP-dependent RNA helicase 28 
 gma-u.5   100782727   DEAD-box ATP-dependent RNA helicase 28-like 
 gma-u.5   100776684   DEAD-box ATP-dependent RNA helicase 28 
 sly-u.5   101266117   DEAD-box ATP-dependent RNA helicase 28 
 osa-u.5   4352218   DEAD-box ATP-dependent RNA helicase 28-like 
 zma-u.5   100281183   ATP-dependent RNA helicase DRS1 
 zma-u.5   100274080   uncharacterized LOC100274080 
 bra-r.6   103847697   DEAD-box ATP-dependent RNA helicase 28 
 bra-r.6   103869833   DEAD-box ATP-dependent RNA helicase 28 
 vvi-u.5   100255871   DEAD-box ATP-dependent RNA helicase 28 
 ppo-u.5   7485601   DEAD-box ATP-dependent RNA helicase 28 
 mtr-u.5   11430849   DEAD-box ATP-dependent RNA helicase 28 
 mtr-u.5   25486470   DEAD-box ATP-dependent RNA helicase 28 
 tae-r.2   123122731   DEAD-box ATP-dependent RNA helicase 28 
 tae-r.2   123104921   DEAD-box ATP-dependent RNA helicase 28 
 tae-r.2   123113210   DEAD-box ATP-dependent RNA helicase 28 
 hvu-r.1   123452121   DEAD-box ATP-dependent RNA helicase 28 
 ghi-r.1   107905517   DEAD-box ATP-dependent RNA helicase 28 
 ghi-r.1   107958219   DEAD-box ATP-dependent RNA helicase 28 
 bna-r.1   106350620   DEAD-box ATP-dependent RNA helicase 28 
 bna-r.1   106360703   DEAD-box ATP-dependent RNA helicase 28-like 
 bna-r.1   106401562   DEAD-box ATP-dependent RNA helicase 28 
 sbi-r.1   8058993   DEAD-box ATP-dependent RNA helicase 28 
 sot-r.1   102602227   DEAD-box ATP-dependent RNA helicase 28 
 cit-r.1   102609280   DEAD-box ATP-dependent RNA helicase 28 
 bdi-r.1   100834429   DEAD-box ATP-dependent RNA helicase 28 
 nta-r.1   107819877   DEAD-box ATP-dependent RNA helicase 28 

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Top 50 coexpressed genes to CHLRE_10g420900v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_10g420900v5 (cre-r.1 coexpression data)

CoexMap"5728277"


creCHLRE_10g420900v5 | Entrez gene ID : 5728277    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 3 1 1 2 2 1 1 2 3 1 2 3 1 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003724 [list] [network] RNA helicase activity  (44 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1223 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (1484 genes)  IEA  
Protein XP_042919864.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  cyto_pero 3,  nucl 1,  plas 1,  cysk_nucl 1,  pero 1  (predict for XP_042919864.1)
Subcellular
localization
TargetP
other 9  (predict for XP_042919864.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_10g420900v5
ath-u.5
for
AT4G16630
gma-u.5
for
100791233
gma-u.5
for
100782727
gma-u.5
for
100776684
sly-u.5
for
101266117
osa-u.5
for
4352218
zma-u.5
for
100281183
zma-u.5
for
100274080
bra-r.6
for
103847697
bra-r.6
for
103869833
vvi-u.5
for
100255871
ppo-u.5
for
7485601
mtr-u.5
for
11430849
mtr-u.5
for
25486470
tae-r.2
for
123122731
tae-r.2
for
123104921
tae-r.2
for
123113210
hvu-r.1
for
123452121
ghi-r.1
for
107905517
ghi-r.1
for
107958219
bna-r.1
for
106350620
bna-r.1
for
106360703
bna-r.1
for
106401562
sbi-r.1
for
8058993
sot-r.1
for
102602227
cit-r.1
for
102609280
bdi-r.1
for
100834429
nta-r.1
for
107819877


Ortholog ID: 7276
Species cre ath gma gma gma sly osa zma zma bra bra vvi ppo mtr mtr tae tae tae hvu ghi ghi bna bna bna sbi sot cit bdi nta
Symbol CHLRE_10g420900v5 AT4G16630 LOC100791233 LOC100782727 LOC100776684 LOC101266117 LOC4352218 LOC100281183 LOC100274080 LOC103847697 LOC103869833 LOC100255871 LOC7485601 LOC11430849 LOC25486470 LOC123122731 LOC123104921 LOC123113210 LOC123452121 LOC107905517 LOC107958219 LOC106350620 LOC106401562 LOC106440550 LOC8058993 LOC102602227 LOC102609280 LOC100834429 LOC107819877
Function* uncharacterized protein DEA(D/H)-box RNA helicase family protein DEAD-box ATP-dependent RNA helicase 28 DEAD-box ATP-dependent RNA helicase 28-like DEAD-box ATP-dependent RNA helicase 28 DEAD-box ATP-dependent RNA helicase 28 DEAD-box ATP-dependent RNA helicase 28-like ATP-dependent RNA helicase DRS1 uncharacterized LOC100274080 DEAD-box ATP-dependent RNA helicase 28 DEAD-box ATP-dependent RNA helicase 28 DEAD-box ATP-dependent RNA helicase 28 DEAD-box ATP-dependent RNA helicase 28 DEAD-box ATP-dependent RNA helicase 28 DEAD-box ATP-dependent RNA helicase 28 DEAD-box ATP-dependent RNA helicase 28 DEAD-box ATP-dependent RNA helicase 28 DEAD-box ATP-dependent RNA helicase 28 DEAD-box ATP-dependent RNA helicase 28 DEAD-box ATP-dependent RNA helicase 28 DEAD-box ATP-dependent RNA helicase 28 DEAD-box ATP-dependent RNA helicase 28 DEAD-box ATP-dependent RNA helicase 28 DEAD-box ATP-dependent RNA helicase 28-like DEAD-box ATP-dependent RNA helicase 28 DEAD-box ATP-dependent RNA helicase 28 DEAD-box ATP-dependent RNA helicase 28 DEAD-box ATP-dependent RNA helicase 28 DEAD-box ATP-dependent RNA helicase 28
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03020 RNA polymerase 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 7
bdi03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5728277 827364 100791233 100782727 100776684 101266117 4352218 100281183 100274080 103847697 103869833 100255871 7485601 11430849 25486470 123122731 123104921 123113210 123452121 107905517 107958219 106350620 106401562 106440550 8058993 102602227 102609280 100834429 107819877
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