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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g558000v5   uncharacterized protein 
 ath-u.5   AT3G18760   Translation elongation factor EF1B/ribosomal protein S6 family protein 
 gma-u.5   100500532   bS6_MRPS6 domain-containing protein 
 gma-u.5   100305721   uncharacterized LOC100305721 
 sly-u.5   101251184   small ribosomal subunit protein bS6m 
 sly-u.5   101252347   uncharacterized LOC101252347 
 osa-u.5   4324645   uncharacterized LOC4324645 
 zma-u.5   100276559   uncharacterized LOC100276559 
 bra-r.6   103869529   uncharacterized LOC103869529 
 bra-r.6   103859767   uncharacterized LOC103859767 
 vvi-u.5   100256785   uncharacterized LOC100256785 
 ppo-u.5   7470031   uncharacterized LOC7470031 
 mtr-u.5   25499355   uncharacterized LOC25499355 
 mtr-u.5   25496957   uncharacterized LOC25496957 
 tae-r.2   123069270   30S ribosomal protein S6 
 tae-r.2   123077789   30S ribosomal protein S6 
 tae-r.2   123149343   30S ribosomal protein S6 
 hvu-r.1   123443186   30S ribosomal protein S6 
 ghi-r.1   107904716   uncharacterized LOC107904716 
 ghi-r.1   107904430   30S ribosomal protein S6 
 bna-r.1   106389230   uncharacterized LOC106389230 
 bna-r.1   BNAA03G34930D   uncharacterized BNAA03G34930D 
 bna-r.1   BNAA05G21400D   uncharacterized BNAA05G21400D 
 sbi-r.1   8079497   30S ribosomal protein S6 
 sot-r.1   102590182   uncharacterized LOC102590182 
 cit-r.1   102620545   uncharacterized LOC102620545 
 bdi-r.1   100840407   30S ribosomal protein S6 
 nta-r.1   107784980   uncharacterized LOC107784980 
 nta-r.1   107790196   small ribosomal subunit protein bS6m 
 nta-r.1   107802543   small ribosomal subunit protein bS6m 

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Top 50 coexpressed genes to CHLRE_12g558000v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g558000v5 (cre-r.1 coexpression data)

CoexMap"5728383"


creCHLRE_12g558000v5 | Entrez gene ID : 5728383      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 2 1 1 2 1 1 2 3 1 2 3 1 1 1 1 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03010 [list] [network] Ribosome (149 genes)
GO BP
GO:0006412 [list] [network] translation  (268 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (168 genes)  IEA  
GO MF
GO:0070181 [list] [network] small ribosomal subunit rRNA binding  (8 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (164 genes)  IEA  
Protein XP_042918875.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  cyto 2,  cyto_mito 2,  chlo 1,  nucl 1,  cyto_plas 1  (predict for XP_042918875.1)
Subcellular
localization
TargetP
other 7  (predict for XP_042918875.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g558000v5
ath-u.5
for
AT3G18760
gma-u.5
for
100500532
gma-u.5
for
100305721
sly-u.5
for
101251184
sly-u.5
for
101252347
osa-u.5
for
4324645
zma-u.5
for
100276559
bra-r.6
for
103869529
bra-r.6
for
103859767
vvi-u.5
for
100256785
ppo-u.5
for
7470031
mtr-u.5
for
25499355
mtr-u.5
for
25496957
tae-r.2
for
123069270
tae-r.2
for
123077789
tae-r.2
for
123149343
hvu-r.1
for
123443186
ghi-r.1
for
107904716
ghi-r.1
for
107904430
bna-r.1
for
106389230
bna-r.1
for
BNAA03G34930D
bna-r.1
for
BNAA05G21400D
sbi-r.1
for
8079497
sot-r.1
for
102590182
cit-r.1
for
102620545
bdi-r.1
for
100840407
nta-r.1
for
107784980
nta-r.1
for
107790196
nta-r.1
for
107802543


Ortholog ID: 6002
Species cre ath gma gma sly sly osa zma bra bra vvi ppo mtr mtr tae tae hvu ghi ghi bna bna bna sbi sot cit bdi nta nta nta
Symbol CHLRE_12g558000v5 AT3G18760 LOC100500532 LOC100305721 LOC101251184 LOC101252347 LOC4324645 LOC100276559 LOC103869529 LOC103859767 LOC100256785 LOC7470031 LOC25499355 LOC25496957 LOC123069270 LOC123149343 LOC123443186 LOC107904716 LOC107904430 LOC106389230 BNAA03G34930D BNAA05G21400D LOC8079497 LOC102590182 LOC102620545 LOC100840407 LOC107784980 LOC107790196 LOC107803040
Function* uncharacterized protein Translation elongation factor EF1B/ribosomal protein S6 family protein bS6_MRPS6 domain-containing protein uncharacterized LOC100305721 small ribosomal subunit protein bS6m uncharacterized LOC101252347 uncharacterized LOC4324645 uncharacterized LOC100276559 uncharacterized LOC103869529 uncharacterized LOC103859767 uncharacterized LOC100256785 uncharacterized LOC7470031 uncharacterized LOC25499355 uncharacterized LOC25496957 30S ribosomal protein S6 30S ribosomal protein S6 30S ribosomal protein S6 uncharacterized LOC107904716 30S ribosomal protein S6 uncharacterized LOC106389230 uncharacterized BNAA03G34930D uncharacterized BNAA05G21400D 30S ribosomal protein S6 uncharacterized LOC102590182 uncharacterized LOC102620545 30S ribosomal protein S6 uncharacterized LOC107784980 small ribosomal subunit protein bS6m small ribosomal subunit protein bS6m-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
cre01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 12
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 3
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 13
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 11
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 7
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 7
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
tae04626 Plant-pathogen interaction 3
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 12
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
ghi04120 Ubiquitin mediated proteolysis 4
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi00230 Purine metabolism 3
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 4
bdi03050 Proteasome 4
bdi03018 RNA degradation 3
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 7
nta04141 Protein processing in endoplasmic reticulum 5
nta00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 12
nta00190 Oxidative phosphorylation 2
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5728383 821407 100500532 100305721 101251184 101252347 4324645 100276559 103869529 103859767 100256785 7470031 25499355 25496957 123069270 123149343 123443186 107904716 107904430 106389230 106439543 106345242 8079497 102590182 102620545 100840407 107784980 107790196 107803040
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