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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g540927v5   uncharacterized protein 
 ath-u.5   MCM9   minichromosome maintenance 9 
 gma-u.5   100776255   probable DNA helicase MCM9 
 sly-u.5   101267855   probable DNA helicase MCM9 
 osa-u.5   4340503   probable DNA helicase MCM9 
 zma-u.5   103631348   probable DNA helicase MCM9 
 bra-r.6   103860392   probable DNA helicase MCM9 
 vvi-u.5   100243188   probable DNA helicase MCM9 
 ppo-u.5   7465927   probable DNA helicase MCM9 
 mtr-u.5   11430751   probable DNA helicase MCM9 
 tae-r.2   123166143   probable DNA helicase MCM9 
 tae-r.2   123150790   probable DNA helicase MCM9 
 hvu-r.1   123410084   probable DNA helicase MCM9 
 ghi-r.1   121210809   probable DNA helicase MCM9 
 ghi-r.1   107929048   probable DNA helicase MCM9 
 sbi-r.1   8080047   probable DNA helicase MCM9 
 sot-r.1   102601275   probable DNA helicase MCM9 
 cit-r.1   102623036   probable DNA helicase MCM9 
 bdi-r.1   100846668   probable DNA helicase MCM9 
 nta-r.1   107819758   putative DNA helicase MCM9 
 nta-r.1   107782873   putative DNA helicase MCM9 

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Top 50 coexpressed genes to CHLRE_12g540927v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g540927v5 (cre-r.1 coexpression data)

CoexMap"5728580"


creCHLRE_12g540927v5 | Entrez gene ID : 5728580    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi sbi sot cit bdi nta bna
Paralog 1 1 1 1 1 1 1 1 1 1 2 1 2 1 1 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (82 genes)  IEA  
GO CC
GO:0042555 [list] [network] MCM complex  (8 genes)  IEA  
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0017116 [list] [network] single-stranded DNA helicase activity  (9 genes)  IEA  
GO:0003697 [list] [network] single-stranded DNA binding  (46 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1223 genes)  IEA  
Protein XP_001703023.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  cyto 1,  mito 1,  cyto_nucl 1  (predict for XP_001703023.2)
Subcellular
localization
TargetP
scret 7  (predict for XP_001703023.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g540927v5
ath-u.5
for
MCM9
gma-u.5
for
100776255
sly-u.5
for
101267855
osa-u.5
for
4340503
zma-u.5
for
103631348
bra-r.6
for
103860392
vvi-u.5
for
100243188
ppo-u.5
for
7465927
mtr-u.5
for
11430751
tae-r.2
for
123166143
tae-r.2
for
123150790
hvu-r.1
for
123410084
ghi-r.1
for
121210809
ghi-r.1
for
107929048
sbi-r.1
for
8080047
sot-r.1
for
102601275
cit-r.1
for
102623036
bdi-r.1
for
100846668
nta-r.1
for
107819758
nta-r.1
for
107782873


Ortholog ID: 10650
Species cre ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi sbi sot cit bdi nta nta
Symbol CHLRE_12g540927v5 MCM9 LOC100776255 LOC101267855 LOC4340503 LOC103631348 LOC103860392 LOC100243188 LOC7465927 LOC11430751 LOC123166143 LOC123150790 LOC123410084 LOC121210809 LOC107929048 LOC8080047 LOC102601275 LOC102623036 LOC100846668 LOC107819758 LOC107782873
Function* uncharacterized protein minichromosome maintenance 9 probable DNA helicase MCM9 probable DNA helicase MCM9 probable DNA helicase MCM9 probable DNA helicase MCM9 probable DNA helicase MCM9 probable DNA helicase MCM9 probable DNA helicase MCM9 probable DNA helicase MCM9 probable DNA helicase MCM9 probable DNA helicase MCM9 probable DNA helicase MCM9 probable DNA helicase MCM9 probable DNA helicase MCM9 probable DNA helicase MCM9 probable DNA helicase MCM9 probable DNA helicase MCM9 probable DNA helicase MCM9 putative DNA helicase MCM9 putative DNA helicase MCM9
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 5
cre03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03460 Fanconi anemia pathway 3
ath03410 Base excision repair 3
ath03030 DNA replication 2
ath03420 Nucleotide excision repair 2
ath03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03430 Mismatch repair 2
gma03460 Fanconi anemia pathway 2
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 9
sly03440 Homologous recombination 2
sly03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 3
mtr03440 Homologous recombination 3
mtr00240 Pyrimidine metabolism 3
mtr01232 Nucleotide metabolism 3
mtr03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 7
tae03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03013 Nucleocytoplasmic transport 3
tae03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03440 Homologous recombination 3
hvu03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 3
ghi03030 DNA replication 2
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 3
ghi03410 Base excision repair 3
ghi03030 DNA replication 2
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 8
sot00240 Pyrimidine metabolism 2
sot01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04814 Motor proteins 3
bdi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 6
nta03460 Fanconi anemia pathway 6
nta03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 5
nta03460 Fanconi anemia pathway 5
nta04814 Motor proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5728580 815890 100776255 101267855 4340503 103631348 103860392 100243188 7465927 11430751 123166143 123150790 123410084 121210809 107929048 8080047 102601275 102623036 100846668 107819758 107782873
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