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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g561200v5   uncharacterized protein 
 ath-u.5   AT1G15370   SNARE-like superfamily protein 
 gma-u.5   100306313   uncharacterized LOC100306313 
 gma-u.5   100305755   uncharacterized LOC100305755 
 gma-u.5   100781055   TSET complex member tstD 
 sly-u.5   101247418   uncharacterized LOC101247418 
 sly-u.5   101263822   uncharacterized LOC101263822 
 osa-u.5   4334836   uncharacterized LOC4334836 
 zma-u.5   100193319   uncharacterized LOC100193319 
 bra-r.6   103842900   TSET complex member tstD 
 bra-r.6   103872328   TSET complex member tstD 
 vvi-u.5   100245686   uncharacterized LOC100245686 
 ppo-u.5   7475120   uncharacterized LOC7475120 
 mtr-u.5   11433582   TSET complex member tstD 
 tae-r.2   100037555   uncharacterized LOC100037555 
 tae-r.2   123123935   TSET complex member tstD 
 hvu-r.1   123397456   uncharacterized LOC123397456 
 ghi-r.1   107897263   TSET complex member tstD 
 ghi-r.1   107954924   TSET complex member tstD 
 ghi-r.1   107914163   TSET complex member tstD 
 bna-r.1   BNAC05G11670D   TSET complex member tstD 
 bna-r.1   106412108   TSET complex member tstD 
 bna-r.1   111206597   TSET complex member tstD-like 
 sbi-r.1   8059257   uncharacterized LOC8059257 
 sot-r.1   102596407   uncharacterized LOC102596407 
 sot-r.1   102594798   uncharacterized LOC102594798 
 cit-r.1   102627195   uncharacterized LOC102627195 
 bdi-r.1   100844620   pentatricopeptide repeat-containing protein At5g46580, chloroplastic 
 nta-r.1   107780332   uncharacterized LOC107780332 

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Top 50 coexpressed genes to CHLRE_12g561200v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g561200v5 (cre-r.1 coexpression data)

CoexMap"5728682"


creCHLRE_12g561200v5 | Entrez gene ID : 5728682      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 3 2 1 1 2 1 1 1 2 1 3 3 1 2 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006890 [list] [network] retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum  (15 genes)  IEA  
GO:0006891 [list] [network] intra-Golgi vesicle-mediated transport  (19 genes)  IEA  
GO:0006886 [list] [network] intracellular protein transport  (159 genes)  IEA  
GO CC
GO:0030126 [list] [network] COPI vesicle coat  (8 genes)  IEA  
GO MF
Protein XP_001703122.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 1,  pero 1,  plas 1,  vacu 1,  chlo_mito 1,  cysk_nucl 1  (predict for XP_001703122.1)
Subcellular
localization
TargetP
other 8  (predict for XP_001703122.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g561200v5
ath-u.5
for
AT1G15370
gma-u.5
for
100306313
gma-u.5
for
100305755
gma-u.5
for
100781055
sly-u.5
for
101247418
sly-u.5
for
101263822
osa-u.5
for
4334836
zma-u.5
for
100193319
bra-r.6
for
103842900
bra-r.6
for
103872328
vvi-u.5
for
100245686
ppo-u.5
for
7475120
mtr-u.5
for
11433582
tae-r.2
for
100037555
tae-r.2
for
123123935
hvu-r.1
for
123397456
ghi-r.1
for
107897263
ghi-r.1
for
107954924
ghi-r.1
for
107914163
bna-r.1
for
BNAC05G11670D
bna-r.1
for
106412108
bna-r.1
for
111206597
sbi-r.1
for
8059257
sot-r.1
for
102596407
sot-r.1
for
102594798
cit-r.1
for
102627195
bdi-r.1
for
100844620
nta-r.1
for
107780332


Ortholog ID: 4816
Species cre ath gma gma gma sly sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna bna sbi sot sot cit bdi nta
Symbol CHLRE_12g561200v5 AT1G15370 LOC100306313 LOC100305755 LOC100781055 LOC101247418 LOC101263822 LOC4334836 LOC100193319 LOC103842900 LOC103872328 LOC100245686 LOC7475120 LOC11433582 LOC100037555 LOC123123935 LOC123397456 LOC107918901 LOC107921026 BNAC05G11670D LOC106412108 LOC106367063 LOC8059257 LOC102596407 LOC102594798 LOC102627195 LOC100844620 LOC107772431
Function* uncharacterized protein SNARE-like superfamily protein uncharacterized LOC100306313 uncharacterized LOC100305755 TSET complex member tstD uncharacterized LOC101247418 uncharacterized LOC101263822 uncharacterized LOC4334836 uncharacterized LOC100193319 TSET complex member tstD TSET complex member tstD uncharacterized LOC100245686 uncharacterized LOC7475120 TSET complex member tstD uncharacterized LOC100037555 TSET complex member tstD uncharacterized LOC123397456 uncharacterized LOC107918901 TSET complex member tstD TSET complex member tstD TSET complex member tstD TSET complex member tstD-like uncharacterized LOC8059257 uncharacterized LOC102596407 uncharacterized LOC102594798 uncharacterized LOC102627195 pentatricopeptide repeat-containing protein At5g46580, chloroplastic uncharacterized LOC107772431
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04142 Lysosome 3
ath04130 SNARE interactions in vesicular transport 2
ath04141 Protein processing in endoplasmic reticulum 2
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00020 Citrate cycle (TCA cycle) 4
gma01200 Carbon metabolism 4
gma01210 2-Oxocarboxylic acid metabolism 4
gma00785 Lipoic acid metabolism 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00020 Citrate cycle (TCA cycle) 4
gma01200 Carbon metabolism 4
gma01210 2-Oxocarboxylic acid metabolism 4
gma04144 Endocytosis 4
gma00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 2
sly04142 Lysosome 2
sly04145 Phagosome 2
sly04141 Protein processing in endoplasmic reticulum 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04142 Lysosome 6
zma04144 Endocytosis 4
zma05100 Bacterial invasion of epithelial cells 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
bra04141 Protein processing in endoplasmic reticulum 2
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04145 Phagosome 2
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 4
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04130 SNARE interactions in vesicular transport 5
tae04144 Endocytosis 4
tae04141 Protein processing in endoplasmic reticulum 2
tae04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 2
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 2
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00600 Sphingolipid metabolism 2
bna04382 Cornified envelope formation 2
bna04130 SNARE interactions in vesicular transport 2
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 3
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 3
sot04142 Lysosome 3
sot04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 3
cit03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 2
nta04130 SNARE interactions in vesicular transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5728682 838106 100306313 100305755 100781055 101247418 101263822 4334836 100193319 103842900 103872328 100245686 7475120 11433582 100037555 123123935 123397456 107918901 107921026 106452234 106412108 106367063 8059257 102596407 102594798 102627195 100844620 107772431
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