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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g162701v5   uncharacterized protein 
 cre-r.1   CHLRE_09g390000v5   uncharacterized protein 
 cre-r.1   CHLRE_03g158550v5   uncharacterized protein 
 cre-r.1   CHLRE_12g508150v5   uncharacterized protein 
 ath-u.5   SYD   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-u.5   CHR11   chromatin-remodeling protein 11 
 ath-u.5   CHR17   chromatin remodeling factor17 
 gma-u.5   100790172   chromatin structure-remodeling complex protein SYD 
 gma-u.5   100791510   ISWI chromatin-remodeling complex ATPase CHR11 
 gma-u.5   100809750   ISWI chromatin-remodeling complex ATPase CHR11 
 sly-u.5   101245879   ISWI chromatin-remodeling complex ATPase CHR11 
 sly-u.5   101267413   ISWI chromatin-remodeling complex ATPase CHR11-like 
 sly-u.5   101247785   chromatin structure-remodeling complex protein SYD 
 osa-u.5   4325731   probable chromatin-remodeling complex ATPase chain 
 osa-u.5   4337825   probable chromatin-remodeling complex ATPase chain 
 osa-u.5   9267065   chromatin structure-remodeling complex protein SYD 
 zma-u.5   103650180   probable chromatin-remodeling complex ATPase chain 
 zma-u.5   100383943   uncharacterized LOC100383943 
 zma-u.5   103635205   probable chromatin-remodeling complex ATPase chain 
 bra-r.6   103849978   ISWI chromatin-remodeling complex ATPase CHR11 
 bra-r.6   103854480   ISWI chromatin-remodeling complex ATPase CHR11 
 bra-r.6   103857840   chromatin structure-remodeling complex protein SYD 
 vvi-u.5   100254600   chromatin structure-remodeling complex protein SYD 
 vvi-u.5   100244281   ISWI chromatin-remodeling complex ATPase CHR11 
 ppo-u.5   7454263   ISWI chromatin-remodeling complex ATPase CHR11 
 ppo-u.5   18101704   chromatin structure-remodeling complex protein SYD 
 ppo-u.5   18109257   ISWI chromatin-remodeling complex ATPase CHR11 
 mtr-u.5   11418353   chromatin structure-remodeling complex protein SYD 
 mtr-u.5   11441860   ISWI chromatin-remodeling complex ATPase CHR11 
 mtr-u.5   25494064   ISWI chromatin-remodeling complex ATPase CHR17 
 tae-r.2   123149820   chromatin structure-remodeling complex protein SYD 
 tae-r.2   123112702   probable chromatin-remodeling complex ATPase chain 
 tae-r.2   123068594   probable chromatin-remodeling complex ATPase chain 
 hvu-r.1   123413476   chromatin structure-remodeling complex protein SYD-like 
 hvu-r.1   123425436   probable chromatin-remodeling complex ATPase chain 
 hvu-r.1   123442674   probable chromatin-remodeling complex ATPase chain 
 ghi-r.1   107915615   chromatin structure-remodeling complex protein SYD 
 ghi-r.1   107929074   chromatin structure-remodeling complex protein SYD 
 ghi-r.1   107931464   ISWI chromatin-remodeling complex ATPase CHR11 
 bna-r.1   125606850   chromatin structure-remodeling complex protein SYD-like 
 bna-r.1   106387801   ISWI chromatin-remodeling complex ATPase CHR17 
 bna-r.1   106400994   ISWI chromatin-remodeling complex ATPase CHR11 
 sbi-r.1   8061515   chromatin structure-remodeling complex protein SYD 
 sbi-r.1   8075365   probable chromatin-remodeling complex ATPase chain 
 sot-r.1   102580212   putative chromatin-remodeling complex ATPase chain 
 sot-r.1   102584530   chromatin structure-remodeling complex protein SYD 
 sot-r.1   102599561   putative chromatin-remodeling complex ATPase chain 
 cit-r.1   102630394   ISWI chromatin-remodeling complex ATPase CHR11 
 cit-r.1   102616926   chromatin structure-remodeling complex protein SYD 
 bdi-r.1   100845251   chromatin structure-remodeling complex protein SYD 
 bdi-r.1   100822641   probable chromatin-remodeling complex ATPase chain 
 bdi-r.1   100836141   probable chromatin-remodeling complex ATPase chain 
 nta-r.1   107763174   ISWI chromatin-remodeling complex ATPase CHR11 
 nta-r.1   107802947   ISWI chromatin-remodeling complex ATPase CHR11 
 nta-r.1   107818563   uncharacterized LOC107818563 

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Top 50 coexpressed genes to CHLRE_03g162701v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g162701v5 (cre-r.1 coexpression data)

CoexMap"5729082"


creCHLRE_03g162701v5 | Entrez gene ID : 5729082    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 4 3 3 3 3 3 3 2 3 3 3 3 3 3 2 3 2 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (47 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0140658 [list] [network] ATP-dependent chromatin remodeler activity  (31 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (670 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1223 genes)  IEA  
Protein XP_042925859.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 3  (predict for XP_042925859.1)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for XP_042925859.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g162701v5
cre-r.1
for
CHLRE_09g390000v5
cre-r.1
for
CHLRE_03g158550v5
cre-r.1
for
CHLRE_12g508150v5
ath-u.5
for
SYD
ath-u.5
for
CHR11
ath-u.5
for
CHR17
gma-u.5
for
100790172
gma-u.5
for
100791510
gma-u.5
for
100809750
sly-u.5
for
101245879
sly-u.5
for
101267413
sly-u.5
for
101247785
osa-u.5
for
4325731
osa-u.5
for
4337825
osa-u.5
for
9267065
zma-u.5
for
103650180
zma-u.5
for
100383943
zma-u.5
for
103635205
bra-r.6
for
103849978
bra-r.6
for
103854480
bra-r.6
for
103857840
vvi-u.5
for
100254600
vvi-u.5
for
100244281
ppo-u.5
for
7454263
ppo-u.5
for
18101704
ppo-u.5
for
18109257
mtr-u.5
for
11418353
mtr-u.5
for
11441860
mtr-u.5
for
25494064
tae-r.2
for
123149820
tae-r.2
for
123112702
tae-r.2
for
123068594
hvu-r.1
for
123413476
hvu-r.1
for
123425436
hvu-r.1
for
123442674
ghi-r.1
for
107915615
ghi-r.1
for
107929074
ghi-r.1
for
107931464
bna-r.1
for
125606850
bna-r.1
for
106387801
bna-r.1
for
106400994
sbi-r.1
for
8061515
sbi-r.1
for
8075365
sot-r.1
for
102580212
sot-r.1
for
102584530
sot-r.1
for
102599561
cit-r.1
for
102630394
cit-r.1
for
102616926
bdi-r.1
for
100845251
bdi-r.1
for
100822641
bdi-r.1
for
100836141
nta-r.1
for
107763174
nta-r.1
for
107802947
nta-r.1
for
107818563


Ortholog ID: 1374
Species cre cre cre ath ath ath gma gma gma sly sly sly osa osa osa zma zma zma bra bra bra vvi vvi ppo ppo ppo mtr mtr mtr tae tae tae hvu hvu hvu ghi ghi ghi bna bna bna sbi sbi sot sot sot cit cit bdi bdi bdi nta nta nta
Symbol CHLRE_03g162701v5 CHLRE_09g390000v5 CHLRE_12g508150v5 SYD CHR11 CHR17 LOC100809750 LOC100814442 LOC100782649 LOC101245879 LOC101267413 LOC101247785 LOC4325731 LOC4337825 LOC9267065 LOC103650180 LOC100383943 LOC103635205 LOC103854480 LOC103857840 LOC103845818 LOC100254600 LOC100244281 LOC7454263 LOC18109257 LOC7475387 LOC11418353 LOC11441860 LOC25494064 LOC123068594 LOC123060112 LOC123170870 LOC123413476 LOC123425436 LOC123442674 LOC107931464 LOC121214480 LOC107939655 LOC106387801 LOC106418220 LOC106371924 LOC8061515 LOC8075365 LOC102580212 LOC102584530 LOC102599561 LOC102630394 LOC102616926 LOC100845251 LOC100822641 LOC100836141 LOC107818563 LOC107777060 LOC107762995
Function* uncharacterized protein uncharacterized protein uncharacterized protein P-loop containing nucleoside triphosphate hydrolases superfamily protein chromatin-remodeling protein 11 chromatin remodeling factor17 ISWI chromatin-remodeling complex ATPase CHR11 ISWI chromatin-remodeling complex ATPase CHR11 ISWI chromatin-remodeling complex ATPase CHR11 ISWI chromatin-remodeling complex ATPase CHR11 ISWI chromatin-remodeling complex ATPase CHR11-like chromatin structure-remodeling complex protein SYD probable chromatin-remodeling complex ATPase chain probable chromatin-remodeling complex ATPase chain chromatin structure-remodeling complex protein SYD probable chromatin-remodeling complex ATPase chain uncharacterized LOC100383943 probable chromatin-remodeling complex ATPase chain ISWI chromatin-remodeling complex ATPase CHR11 chromatin structure-remodeling complex protein SYD ISWI chromatin-remodeling complex ATPase CHR17 chromatin structure-remodeling complex protein SYD ISWI chromatin-remodeling complex ATPase CHR11 ISWI chromatin-remodeling complex ATPase CHR11 ISWI chromatin-remodeling complex ATPase CHR11 chromatin structure-remodeling complex protein SYD chromatin structure-remodeling complex protein SYD ISWI chromatin-remodeling complex ATPase CHR11 ISWI chromatin-remodeling complex ATPase CHR17 probable chromatin-remodeling complex ATPase chain probable chromatin-remodeling complex ATPase chain uncharacterized LOC123170870 chromatin structure-remodeling complex protein SYD-like probable chromatin-remodeling complex ATPase chain probable chromatin-remodeling complex ATPase chain ISWI chromatin-remodeling complex ATPase CHR11 ISWI chromatin-remodeling complex ATPase CHR11 ISWI chromatin-remodeling complex ATPase CHR11 ISWI chromatin-remodeling complex ATPase CHR17 ISWI chromatin-remodeling complex ATPase CHR11-like ISWI chromatin-remodeling complex ATPase CHR17 chromatin structure-remodeling complex protein SYD probable chromatin-remodeling complex ATPase chain putative chromatin-remodeling complex ATPase chain chromatin structure-remodeling complex protein SYD putative chromatin-remodeling complex ATPase chain ISWI chromatin-remodeling complex ATPase CHR11 chromatin structure-remodeling complex protein SYD chromatin structure-remodeling complex protein SYD probable chromatin-remodeling complex ATPase chain probable chromatin-remodeling complex ATPase chain uncharacterized LOC107818563 uncharacterized LOC107777060 putative chromatin-remodeling complex ATPase chain
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03082 ATP-dependent chromatin remodeling 2
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 4
gma03082 ATP-dependent chromatin remodeling 3
gma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03082 ATP-dependent chromatin remodeling 3
gma03250 Viral life cycle - HIV-1 2
gma00270 Cysteine and methionine metabolism 2
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 3
sly04120 Ubiquitin mediated proteolysis 2
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00270 Cysteine and methionine metabolism 2
zma03082 ATP-dependent chromatin remodeling 2
zma03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma03082 ATP-dependent chromatin remodeling 2
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 7
bra03013 Nucleocytoplasmic transport 3
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 3
bra03082 ATP-dependent chromatin remodeling 2
bra00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 4
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 4
ppo03083 Polycomb repressive complex 2
ppo03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 4
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 4
mtr03013 Nucleocytoplasmic transport 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr03082 ATP-dependent chromatin remodeling 2
mtr03083 Polycomb repressive complex 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03430 Mismatch repair 3
tae03082 ATP-dependent chromatin remodeling 3
tae00230 Purine metabolism 3
tae00240 Pyrimidine metabolism 3
tae00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae00230 Purine metabolism 2
tae00240 Pyrimidine metabolism 2
tae00480 Glutathione metabolism 2
tae01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 2
tae04518 Integrin signaling 2
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 3
hvu04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 6
ghi04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03013 Nucleocytoplasmic transport 3
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
cit04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03082 ATP-dependent chromatin remodeling 2
nta03022 Basal transcription factors 2
nta04120 Ubiquitin mediated proteolysis 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 4
nta03082 ATP-dependent chromatin remodeling 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03082 ATP-dependent chromatin remodeling 4
nta03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5729082 5720064 5716515 817375 819814 831980 100809750 100814442 100782649 101245879 101267413 101247785 4325731 4337825 9267065 103650180 100383943 103635205 103854480 103857840 103845818 100254600 100244281 7454263 18109257 7475387 11418353 11441860 25494064 123068594 123060112 123170870 123413476 123425436 123442674 107931464 121214480 107939655 106387801 106418220 106371924 8061515 8075365 102580212 102584530 102599561 102630394 102616926 100845251 100822641 100836141 107818563 107777060 107762995
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