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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g161800v5   uncharacterized protein 
 ath-u.5   AT1G67120   midasin-like protein 
 gma-u.5   102669841   midasin 
 gma-u.5   102663906   midasin 
 sly-u.5   101258364   midasin 
 osa-u.5   4348797   midasin 
 zma-u.5   103630487   midasin 
 bra-r.6   103852375   midasin 
 vvi-u.5   100244657   midasin 
 ppo-u.5   18106995   midasin 
 mtr-u.5   11434046   midasin 
 tae-r.2   123180955   midasin 
 tae-r.2   123044699   midasin 
 tae-r.2   123119599   midasin 
 hvu-r.1   123430085   midasin 
 ghi-r.1   107916406   midasin 
 ghi-r.1   107897422   midasin 
 bna-r.1   125584120   midasin-like 
 bna-r.1   106409436   midasin 
 bna-r.1   106409427   midasin-like 
 sbi-r.1   8077000   midasin 
 sot-r.1   102600731   midasin 
 cit-r.1   102612702   midasin 
 bdi-r.1   100834623   midasin 
 nta-r.1   107822078   midasin 
 nta-r.1   107822074   midasin-like 

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Top 50 coexpressed genes to CHLRE_03g161800v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g161800v5 (cre-r.1 coexpression data)

CoexMap"5729093"


creCHLRE_03g161800v5 | Entrez gene ID : 5729093    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 1 1 1 1 1 3 1 2 3 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000027 [list] [network] ribosomal large subunit assembly  (20 genes)  IEA  
GO:0006364 [list] [network] rRNA processing  (218 genes)  IEA  
GO CC
GO:0030687 [list] [network] preribosome, large subunit precursor  (23 genes)  IEA  
GO MF
GO:0016887 [list] [network] ATP hydrolysis activity  (290 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1223 genes)  IEA  
Protein XP_042925841.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 3  (predict for XP_042925841.1)
Subcellular
localization
TargetP
mito 6,  other 4  (predict for XP_042925841.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g161800v5
ath-u.5
for
AT1G67120
gma-u.5
for
102669841
gma-u.5
for
102663906
sly-u.5
for
101258364
osa-u.5
for
4348797
zma-u.5
for
103630487
bra-r.6
for
103852375
vvi-u.5
for
100244657
ppo-u.5
for
18106995
mtr-u.5
for
11434046
tae-r.2
for
123180955
tae-r.2
for
123044699
tae-r.2
for
123119599
hvu-r.1
for
123430085
ghi-r.1
for
107916406
ghi-r.1
for
107897422
bna-r.1
for
125584120
bna-r.1
for
106409436
bna-r.1
for
106409427
sbi-r.1
for
8077000
sot-r.1
for
102600731
cit-r.1
for
102612702
bdi-r.1
for
100834623
nta-r.1
for
107822078
nta-r.1
for
107822074


Ortholog ID: 8757
Species cre ath gma gma sly osa zma bra vvi ppo mtr tae tae tae hvu ghi ghi bna sbi sot cit bdi nta nta
Symbol CHLRE_03g161800v5 AT1G67120 LOC102669841 LOC102663906 LOC101258364 LOC4348797 LOC103630487 LOC103852375 LOC100244657 LOC18106995 LOC11434046 LOC123180955 LOC123044699 LOC123119599 LOC123430085 LOC107916406 LOC107897422 LOC106409427 LOC8077000 LOC102600731 LOC102612702 LOC100834623 LOC107822078 LOC107822074
Function* uncharacterized protein midasin-like protein midasin midasin midasin midasin midasin midasin midasin midasin midasin midasin midasin midasin midasin midasin midasin midasin-like midasin midasin midasin midasin midasin midasin-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
ath03020 RNA polymerase 3
ath03018 RNA degradation 2
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 7
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 3
sly03020 RNA polymerase 3
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 3
osa03020 RNA polymerase 2
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 3
ppo03013 Nucleocytoplasmic transport 2
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae03440 Homologous recombination 3
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae03440 Homologous recombination 4
tae03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae03020 RNA polymerase 3
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 6
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi03440 Homologous recombination 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 6
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi03440 Homologous recombination 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 2
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 7
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
cit03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 4
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5729093 843032 102669841 102663906 101258364 4348797 103630487 103852375 100244657 18106995 11434046 123180955 123044699 123119599 123430085 107916406 107897422 106409427 8077000 102600731 102612702 100834623 107822078 107822074
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