ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cre-r.1	CHLRE_17g744447v5	uncharacterized protein
ath-u.5	PDR2	phosphate deficiency response 2
gma-u.5	100807022	probable manganese-transporting ATPase PDR2
gma-u.5	100789385	probable manganese-transporting ATPase PDR2
sly-u.5	101249766	probable manganese-transporting ATPase PDR2
osa-u.5	4338738	probable manganese-transporting ATPase PDR2
zma-u.5	103635679	probable manganese-transporting ATPase PDR2
zma-u.5	100502175	uncharacterized LOC100502175
bra-r.6	103865590	probable manganese-transporting ATPase PDR2
bra-r.6	103854889	probable manganese-transporting ATPase PDR2
vvi-u.5	100257916	probable manganese-transporting ATPase PDR2
ppo-u.5	7465895	probable manganese-transporting ATPase PDR2
ppo-u.5	18097753	probable manganese-transporting ATPase PDR2
mtr-u.5	25489896	probable manganese-transporting ATPase PDR2
tae-r.2	123181956	probable manganese-transporting ATPase PDR2
tae-r.2	123132196	probable manganese-transporting ATPase PDR2
tae-r.2	123055100	probable manganese-transporting ATPase PDR2
hvu-r.1	123441704	probable manganese-transporting ATPase PDR2
ghi-r.1	107919948	probable manganese-transporting ATPase PDR2
ghi-r.1	107895049	probable manganese-transporting ATPase PDR2
bna-r.1	125594021	probable manganese-transporting ATPase PDR2
bna-r.1	125597786	probable manganese-transporting ATPase PDR2
bna-r.1	106404468	probable manganese-transporting ATPase PDR2
sbi-r.1	8085105	probable manganese-transporting ATPase PDR2
sot-r.1	102595993	probable manganese-transporting ATPase PDR2
cit-r.1	102610173	probable manganese-transporting ATPase PDR2
bdi-r.1	100840822	probable manganese-transporting ATPase PDR2
nta-r.1	107786766	putative manganese-transporting ATPase PDR2
nta-r.1	107786589	putative manganese-transporting ATPase PDR2

Top 50 coexpressed genes to CHLRE_17g744447v5 (cre-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to CHLRE_17g744447v5 (cre-r.1 coexpression data)

CoexMap"5729135"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006874 [list] [network] intracellular calcium ion homeostasis

(39 genes)

IEA

GO CC

GO:0005789 [list] [network] endoplasmic reticulum membrane

(120 genes)

IEA

GO MF

GO:0015662 [list] [network] P-type ion transporter activity	(18 genes)	IEA
GO:0016887 [list] [network] ATP hydrolysis activity	(290 genes)	IEA
GO:0005524 [list] [network] ATP binding	(1223 genes)	IEA

Protein

XP_042915174.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 8, chlo 1, vacu 1, E.R. 1, E.R._vacu 1

(predict for XP_042915174.1)

Subcellular
localization
TargetP

mito 6, scret 6

(predict for XP_042915174.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_17g744447v5	ath-u.5 for PDR2	gma-u.5 for 100807022	gma-u.5 for 100789385	sly-u.5 for 101249766	osa-u.5 for 4338738	zma-u.5 for 103635679	zma-u.5 for 100502175	bra-r.6 for 103865590	bra-r.6 for 103854889	vvi-u.5 for 100257916	ppo-u.5 for 7465895	ppo-u.5 for 18097753	mtr-u.5 for 25489896	tae-r.2 for 123181956	tae-r.2 for 123132196	tae-r.2 for 123055100	hvu-r.1 for 123441704	ghi-r.1 for 107919948	ghi-r.1 for 107895049	bna-r.1 for 125594021	bna-r.1 for 125597786	bna-r.1 for 106404468	sbi-r.1 for 8085105	sot-r.1 for 102595993	cit-r.1 for 102610173	bdi-r.1 for 100840822	nta-r.1 for 107786766	nta-r.1 for 107786589

Ortholog

Ortholog ID: 7349

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

PDR2

Function^*

uncharacterized protein

phosphate deficiency response 2

probable manganese-transporting ATPase PDR2

uncharacterized LOC100502175

probable manganese-transporting ATPase PDR2

putative manganese-transporting ATPase PDR2

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04141	Protein processing in endoplasmic reticulum	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	3
ath03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	4
sly04141	Protein processing in endoplasmic reticulum	3
sly05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	8
zma03018	RNA degradation	2
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	3
zma00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2
zma04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	2
bra04141	Protein processing in endoplasmic reticulum	2
bra04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	2
bra03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04142	Lysosome	3
vvi04144	Endocytosis	3
vvi03013	Nucleocytoplasmic transport	2
vvi05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	3
ppo04142	Lysosome	2
ppo05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	3
ppo04142	Lysosome	2
ppo05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00500	Starch and sucrose metabolism	2
mtr04814	Motor proteins	2
mtr03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	5
tae00510	N-Glycan biosynthesis	5
tae00513	Various types of N-glycan biosynthesis	5
tae04141	Protein processing in endoplasmic reticulum	5
tae04142	Lysosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	3
tae03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	6
tae03083	Polycomb repressive complex	3
tae04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03013	Nucleocytoplasmic transport	2
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03013	Nucleocytoplasmic transport	2
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03013	Nucleocytoplasmic transport	2
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	10
sbi00510	N-Glycan biosynthesis	7
sbi00513	Various types of N-glycan biosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	4
sot04144	Endocytosis	4
sot05100	Bacterial invasion of epithelial cells	4
sot04142	Lysosome	3
sot03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04144	Endocytosis	3
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03050	Proteasome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	2
nta03015	mRNA surveillance pathway	2

Expression

Expression pattern

Entrez Gene ID^*

5729135

832428

100807022

100789385

101249766

4338738

103635679

100502175

103865590

103854889

100257916

7465895

18097753

25489896

123181956

123132196

123055100

123441704

107919948

107895049

125597786

106382696

106362680

8085105

102595993

102610173

100840822

107786766

107786589

The preparation time of this page was 0.1 [sec].


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	1	2	1	1	2	2	1	2	1	3	1	2	3	1	1	1	1	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_17g744447v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_17g744447v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**