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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_04g231124v5   uncharacterized protein 
 ath-u.5   AT3G12130   KH domain-containing protein / zinc finger (CCCH type) family protein 
 ath-u.5   AT5G06770   KH domain-containing protein / zinc finger (CCCH type) family protein 
 gma-u.5   100778470   zinc finger CCCH domain-containing protein 31 
 gma-u.5   100803981   KH and zinc finger (CCCH type) domain-containing protein 
 gma-u.5   100817463   zinc finger CCCH domain-containing protein 14-like 
 sly-u.5   101262368   zinc finger CCCH domain-containing protein 14 
 sly-u.5   101267206   zinc finger CCCH domain-containing protein 14-like 
 sly-u.5   101262841   zinc finger CCCH domain-containing protein 14 
 osa-u.5   4328599   zinc finger CCCH domain-containing protein 14-like 
 osa-u.5   4337319   zinc finger CCCH domain-containing protein 31-like 
 osa-u.5   4341537   zinc finger CCCH domain-containing protein 44-like 
 zma-u.5   100284355   zinc finger C-x8-C-x5-C-x3-H type family protein 
 zma-u.5   100193411   Zinc finger CCCH domain-containing protein 52 
 zma-u.5   100192020   uncharacterized LOC100192020 
 bra-r.6   103870275   zinc finger CCCH domain-containing protein 36 
 bra-r.6   103859428   zinc finger CCCH domain-containing protein 36 
 vvi-u.5   100240955   zinc finger CCCH domain-containing protein 14-like 
 vvi-u.5   100263958   zinc finger CCCH domain-containing protein 14 
 vvi-u.5   100245220   zinc finger CCCH domain-containing protein 14 
 ppo-u.5   7479532   zinc finger CCCH domain-containing protein 31 
 ppo-u.5   7468933   zinc finger CCCH domain-containing protein 31 
 ppo-u.5   7461390   zinc finger CCCH domain-containing protein 14 
 mtr-u.5   11430803   zinc finger CCCH domain-containing protein 14 
 mtr-u.5   25483515   zinc finger CCCH domain-containing protein 44 
 tae-r.2   123144234   zinc finger CCCH domain-containing protein 14 
 tae-r.2   123046933   zinc finger CCCH domain-containing protein 31 
 tae-r.2   123054763   zinc finger CCCH domain-containing protein 31 
 hvu-r.1   123412773   zinc finger CCCH domain-containing protein 44-like 
 hvu-r.1   123427992   zinc finger CCCH domain-containing protein 31-like 
 hvu-r.1   123402389   zinc finger CCCH domain-containing protein 14-like 
 ghi-r.1   107922185   zinc finger CCCH domain-containing protein 14 
 ghi-r.1   107922374   zinc finger CCCH domain-containing protein 14 
 ghi-r.1   107953524   zinc finger CCCH domain-containing protein 14 
 bna-r.1   111202415   zinc finger CCCH domain-containing protein 36-like 
 bna-r.1   106397874   zinc finger CCCH domain-containing protein 36-like 
 bna-r.1   106350903   zinc finger CCCH domain-containing protein 36-like 
 sbi-r.1   8070284   zinc finger CCCH domain-containing protein 31 
 sbi-r.1   8082890   zinc finger CCCH domain-containing protein 14 
 sbi-r.1   110431042   zinc finger CCCH domain-containing protein 44-like 
 sot-r.1   102590737   zinc finger CCCH domain-containing protein 31-like 
 sot-r.1   102597120   zinc finger CCCH domain-containing protein 14-like 
 sot-r.1   102600080   zinc finger CCCH domain-containing protein 31-like 
 cit-r.1   102628309   zinc finger CCCH domain-containing protein 14 
 cit-r.1   102610550   zinc finger CCCH domain-containing protein 14 
 bdi-r.1   100823174   zinc finger CCCH domain-containing protein 14 
 bdi-r.1   100823269   zinc finger CCCH domain-containing protein 14 
 bdi-r.1   100825722   zinc finger CCCH domain-containing protein 14 
 nta-r.1   107765608   zinc finger CCCH domain-containing protein 52 
 nta-r.1   107828626   zinc finger CCCH domain-containing protein 52-like 
 nta-r.1   107819065   zinc finger CCCH domain-containing protein 14 

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Top 50 coexpressed genes to CHLRE_04g231124v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_04g231124v5 (cre-r.1 coexpression data)

CoexMap"5729232"


creCHLRE_04g231124v5 | Entrez gene ID : 5729232      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 2 3 3 3 3 2 3 3 2 3 3 3 3 3 3 2 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (109 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (704 genes)  IEA  
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_001703693.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  nucl 3  (predict for XP_001703693.1)
Subcellular
localization
TargetP
other 9  (predict for XP_001703693.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_04g231124v5
ath-u.5
for
AT3G12130
ath-u.5
for
AT5G06770
gma-u.5
for
100778470
gma-u.5
for
100803981
gma-u.5
for
100817463
sly-u.5
for
101262368
sly-u.5
for
101267206
sly-u.5
for
101262841
osa-u.5
for
4328599
osa-u.5
for
4337319
osa-u.5
for
4341537
zma-u.5
for
100284355
zma-u.5
for
100193411
zma-u.5
for
100192020
bra-r.6
for
103870275
bra-r.6
for
103859428
vvi-u.5
for
100240955
vvi-u.5
for
100263958
vvi-u.5
for
100245220
ppo-u.5
for
7479532
ppo-u.5
for
7468933
ppo-u.5
for
7461390
mtr-u.5
for
11430803
mtr-u.5
for
25483515
tae-r.2
for
123144234
tae-r.2
for
123046933
tae-r.2
for
123054763
hvu-r.1
for
123412773
hvu-r.1
for
123427992
hvu-r.1
for
123402389
ghi-r.1
for
107922185
ghi-r.1
for
107922374
ghi-r.1
for
107953524
bna-r.1
for
111202415
bna-r.1
for
106397874
bna-r.1
for
106350903
sbi-r.1
for
8070284
sbi-r.1
for
8082890
sbi-r.1
for
110431042
sot-r.1
for
102590737
sot-r.1
for
102597120
sot-r.1
for
102600080
cit-r.1
for
102628309
cit-r.1
for
102610550
bdi-r.1
for
100823174
bdi-r.1
for
100823269
bdi-r.1
for
100825722
nta-r.1
for
107765608
nta-r.1
for
107828626
nta-r.1
for
107819065


Ortholog ID: 970
Species cre ath ath gma gma gma sly sly sly osa osa osa zma zma zma bra bra bra vvi vvi vvi ppo ppo ppo mtr mtr tae tae hvu hvu hvu ghi ghi ghi bna bna bna sbi sbi sbi sot sot sot cit cit bdi bdi bdi nta nta nta
Symbol CHLRE_04g231124v5 AT3G12130 AT5G06770 LOC100817463 LOC100818781 LOC100792652 LOC101262368 LOC101267206 LOC101251616 LOC4328599 LOC4337319 LOC4341537 LOC100284355 LOC100193411 LOC100192020 LOC103870275 LOC103859428 LOC103845792 LOC100240955 LOC100263958 LOC100245220 LOC7468933 LOC7461390 LOC7455767 LOC11430803 LOC25483515 LOC123144234 LOC123046933 LOC123412773 LOC123427992 LOC123402389 LOC107922185 LOC107953524 LOC107959332 LOC106350903 LOC106356782 LOC106452525 LOC8070284 LOC8082890 LOC110431042 LOC102590737 LOC102597120 LOC102605825 LOC102628309 LOC102610550 LOC100823174 LOC100825722 LOC100832005 LOC107819065 LOC107813189 LOC107831868
Function* uncharacterized protein KH domain-containing protein / zinc finger (CCCH type) family protein KH domain-containing protein / zinc finger (CCCH type) family protein zinc finger CCCH domain-containing protein 14-like zinc finger CCCH domain-containing protein 14-like zinc finger CCCH domain-containing protein 14 zinc finger CCCH domain-containing protein 14 zinc finger CCCH domain-containing protein 14-like zinc finger CCCH domain-containing protein 31 zinc finger CCCH domain-containing protein 14-like zinc finger CCCH domain-containing protein 31-like zinc finger CCCH domain-containing protein 44-like zinc finger C-x8-C-x5-C-x3-H type family protein Zinc finger CCCH domain-containing protein 52 uncharacterized LOC100192020 zinc finger CCCH domain-containing protein 36 zinc finger CCCH domain-containing protein 36 zinc finger CCCH domain-containing protein 36 zinc finger CCCH domain-containing protein 14-like zinc finger CCCH domain-containing protein 14 zinc finger CCCH domain-containing protein 14 zinc finger CCCH domain-containing protein 31 zinc finger CCCH domain-containing protein 14 zinc finger CCCH domain-containing protein 14 zinc finger CCCH domain-containing protein 14 zinc finger CCCH domain-containing protein 44 zinc finger CCCH domain-containing protein 14 zinc finger CCCH domain-containing protein 31 zinc finger CCCH domain-containing protein 44-like zinc finger CCCH domain-containing protein 31-like zinc finger CCCH domain-containing protein 14-like zinc finger CCCH domain-containing protein 14 zinc finger CCCH domain-containing protein 14 zinc finger CCCH domain-containing protein 14 zinc finger CCCH domain-containing protein 36-like zinc finger CCCH domain-containing protein 36 zinc finger CCCH domain-containing protein 36 zinc finger CCCH domain-containing protein 31 zinc finger CCCH domain-containing protein 14 zinc finger CCCH domain-containing protein 44-like zinc finger CCCH domain-containing protein 31-like zinc finger CCCH domain-containing protein 14-like zinc finger CCCH domain-containing protein 14-like zinc finger CCCH domain-containing protein 14 zinc finger CCCH domain-containing protein 14 zinc finger CCCH domain-containing protein 14 zinc finger CCCH domain-containing protein 14 zinc finger CCCH domain-containing protein 31 zinc finger CCCH domain-containing protein 14 zinc finger CCCH domain-containing protein 14-like zinc finger CCCH domain-containing protein 14
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00514 Other types of O-glycan biosynthesis 4
cre04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 3
ath03013 Nucleocytoplasmic transport 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma03040 Spliceosome 3
gma03082 ATP-dependent chromatin remodeling 2
gma03015 mRNA surveillance pathway 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 3
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
osa03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
zma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 8
zma03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
vvi01240 Biosynthesis of cofactors 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 9
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
mtr03040 Spliceosome 4
mtr03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 6
cit03013 Nucleocytoplasmic transport 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta03040 Spliceosome 2
nta00190 Oxidative phosphorylation 2
nta04142 Lysosome 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03030 DNA replication 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5729232 820388 830566 100817463 100818781 100792652 101262368 101267206 101251616 4328599 4337319 4341537 100284355 100193411 100192020 103870275 103859428 103845792 100240955 100263958 100245220 7468933 7461390 7455767 11430803 25483515 123144234 123046933 123412773 123427992 123402389 107922185 107953524 107959332 106350903 106356782 106452525 8070284 8082890 110431042 102590737 102597120 102605825 102628309 102610550 100823174 100825722 100832005 107819065 107813189 107831868
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