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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_08g358563v5   uncharacterized protein 
 cre-r.1   CHLRE_07g329150v5   uncharacterized protein 
 cre-r.1   CHLRE_03g182950v5   uncharacterized protein 
 cre-r.1   CHLRE_07g349100v5   uncharacterized protein 
 ath-u.5   MEE29   helicase domain-containing protein 
 ath-u.5   ESP3   RNA helicase family protein 
 ath-u.5   AT1G26370   RNA helicase family protein 
 gma-u.5   100819776   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 
 gma-u.5   100817506   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 
 gma-u.5   100815173   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 
 sly-u.5   101265017   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like 
 sly-u.5   101244529   RNA helicase family protein 
 sly-u.5   101265161   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 
 osa-u.5   4332645   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3 
 zma-u.5   100191798   uncharacterized LOC100191798 
 zma-u.5   100383864   uncharacterized LOC100383864 
 zma-u.5   100282531   pre-mRNA-splicing factor ATP-dependent RNA helicase 
 bra-r.6   103858239   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3 
 bra-r.6   103869316   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH8 
 bra-r.6   103874751   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 
 vvi-u.5   100257193   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 
 vvi-u.5   100253689   probable pre-mRNA-splicing factor ATP-dependent RNA helicase-like 
 vvi-u.5   100244993   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 
 ppo-u.5   18105660   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 
 ppo-u.5   7476356   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 
 ppo-u.5   7498215   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 
 mtr-u.5   11410482   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 
 mtr-u.5   11407634   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 
 mtr-u.5   112419119   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 
 tae-r.2   123106094   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 
 tae-r.2   123101822   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 
 tae-r.2   123099135   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 
 hvu-r.1   123412714   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 
 hvu-r.1   123409329   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 
 hvu-r.1   123443153   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 
 ghi-r.1   107951242   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 
 ghi-r.1   107946367   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 
 ghi-r.1   107933374   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like 
 bna-r.1   106346825   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH8 
 bna-r.1   111213830   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 
 bna-r.1   106389248   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3 
 sbi-r.1   8054265   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 
 sbi-r.1   8083713   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3 
 sbi-r.1   8079520   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 
 sot-r.1   102578155   probable pre-mRNA-splicing factor ATP-dependent RNA helicase 
 sot-r.1   102590563   probable pre-mRNA-splicing factor ATP-dependent RNA helicase 
 sot-r.1   102594667   probable pre-mRNA-splicing factor ATP-dependent RNA helicase 
 cit-r.1   102615247   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 
 cit-r.1   102618425   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 
 cit-r.1   102623010   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 
 bdi-r.1   100835731   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 
 bdi-r.1   100842452   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 
 bdi-r.1   100834233   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 
 nta-r.1   107761727   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 
 nta-r.1   107832486   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like 
 nta-r.1   107804351   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 

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Top 50 coexpressed genes to CHLRE_08g358563v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_08g358563v5 (cre-r.1 coexpression data)

CoexMap"5729273"


creCHLRE_08g358563v5 | Entrez gene ID : 5729273    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 4 3 3 3 1 3 3 3 3 3 3 3 3 3 3 3 3 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000390 [list] [network] spliceosomal complex disassembly  (2 genes)  IEA  
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (103 genes)  IEA  
GO CC
GO:0071013 [list] [network] catalytic step 2 spliceosome  (45 genes)  IEA  
GO:0005622 [list] [network] intracellular anatomical structure  (4579 genes)  IEA  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (44 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (670 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1223 genes)  IEA  
Protein XP_042921747.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9,  nucl 1  (predict for XP_042921747.1)
Subcellular
localization
TargetP
scret 5,  other 4  (predict for XP_042921747.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_08g358563v5
cre-r.1
for
CHLRE_07g329150v5
cre-r.1
for
CHLRE_03g182950v5
cre-r.1
for
CHLRE_07g349100v5
ath-u.5
for
MEE29
ath-u.5
for
ESP3
ath-u.5
for
AT1G26370
gma-u.5
for
100819776
gma-u.5
for
100817506
gma-u.5
for
100815173
sly-u.5
for
101265017
sly-u.5
for
101244529
sly-u.5
for
101265161
osa-u.5
for
4332645
zma-u.5
for
100191798
zma-u.5
for
100383864
zma-u.5
for
100282531
bra-r.6
for
103858239
bra-r.6
for
103869316
bra-r.6
for
103874751
vvi-u.5
for
100257193
vvi-u.5
for
100253689
vvi-u.5
for
100244993
ppo-u.5
for
18105660
ppo-u.5
for
7476356
ppo-u.5
for
7498215
mtr-u.5
for
11410482
mtr-u.5
for
11407634
mtr-u.5
for
112419119
tae-r.2
for
123106094
tae-r.2
for
123101822
tae-r.2
for
123099135
hvu-r.1
for
123412714
hvu-r.1
for
123409329
hvu-r.1
for
123443153
ghi-r.1
for
107951242
ghi-r.1
for
107946367
ghi-r.1
for
107933374
bna-r.1
for
106346825
bna-r.1
for
111213830
bna-r.1
for
106389248
sbi-r.1
for
8054265
sbi-r.1
for
8083713
sbi-r.1
for
8079520
sot-r.1
for
102578155
sot-r.1
for
102590563
sot-r.1
for
102594667
cit-r.1
for
102615247
cit-r.1
for
102618425
cit-r.1
for
102623010
bdi-r.1
for
100835731
bdi-r.1
for
100842452
bdi-r.1
for
100834233
nta-r.1
for
107761727
nta-r.1
for
107832486
nta-r.1
for
107804351


Ortholog ID: 280
Species cre cre cre ath ath ath gma gma gma sly sly sly osa osa zma zma zma bra bra bra vvi vvi vvi ppo ppo ppo mtr mtr mtr tae tae tae hvu hvu ghi ghi ghi bna bna bna sbi sbi sbi sot sot sot cit cit cit bdi bdi bdi nta nta nta
Symbol CHLRE_03g182950v5 CHLRE_07g349100v5 CHLRE_11g467654v5 AT1G26370 AT3G62310 AT2G47250 LOC100790809 LOC100781090 LOC100787259 LOC101265161 LOC101266273 LOC101253458 LOC4332645 LOC4329095 LOC100191798 LOC100281385 LOC103649589 LOC103858239 LOC103856434 LOC103842049 LOC100257193 LOC100244993 LOC100262984 LOC18105660 LOC7485208 LOC7481418 LOC11407634 LOC120580139 LOC25488674 LOC123054340 LOC123150349 LOC123164193 LOC123448425 LOC123449983 LOC107946014 LOC107906342 LOC107930383 LOC106389248 LOC106368515 LOC106357504 LOC8083713 LOC8074510 LOC8064256 LOC102590563 LOC102594667 LOC102602289 LOC102618425 LOC102623010 LOC102615226 LOC100824836 LOC100821046 LOC100835841 LOC107761727 LOC107768863 LOC107817775
Function* uncharacterized protein uncharacterized protein uncharacterized protein RNA helicase family protein RNA helicase family protein RNA helicase family protein probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 uncharacterized LOC100191798 ATP-dependent RNA helicase DHX8 ATP-dependent RNA helicase probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 probable pre-mRNA-splicing factor ATP-dependent RNA helicase probable pre-mRNA-splicing factor ATP-dependent RNA helicase putative ATP-dependent RNA helicase DHX33 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 4
ath03040 Spliceosome 4
ath03015 mRNA surveillance pathway 3
ath03013 Nucleocytoplasmic transport 2
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03015 mRNA surveillance pathway 3
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma04120 Ubiquitin mediated proteolysis 3
gma00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03008 Ribosome biogenesis in eukaryotes 2
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
zma03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
zma03050 Proteasome 2
zma03013 Nucleocytoplasmic transport 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 5
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
vvi00280 Valine, leucine and isoleucine degradation 2
vvi00410 beta-Alanine metabolism 2
vvi00640 Propanoate metabolism 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03082 ATP-dependent chromatin remodeling 2
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 3
vvi04144 Endocytosis 3
vvi03440 Homologous recombination 2
vvi03013 Nucleocytoplasmic transport 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 4
mtr03040 Spliceosome 3
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 2
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu00020 Citrate cycle (TCA cycle) 2
hvu00785 Lipoic acid metabolism 2
hvu01200 Carbon metabolism 2
hvu01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00261 Monobactam biosynthesis 3
bna00300 Lysine biosynthesis 3
bna01230 Biosynthesis of amino acids 3
bna03040 Spliceosome 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
bna03013 Nucleocytoplasmic transport 5
bna03015 mRNA surveillance pathway 3
bna00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03450 Non-homologous end-joining 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 5
sbi03018 RNA degradation 3
sbi03013 Nucleocytoplasmic transport 3
sbi03015 mRNA surveillance pathway 3
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
sot04141 Protein processing in endoplasmic reticulum 6
sot04626 Plant-pathogen interaction 3
sot04144 Endocytosis 2
sot03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 3
sot04120 Ubiquitin mediated proteolysis 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 10
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 5
nta03040 Spliceosome 4
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
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