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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_17g717750v5   uncharacterized protein 
 ath-u.5   PLP3a   thioredoxin domain PLP3A-like protein 
 ath-u.5   PLP3b   thioredoxin domain PLP3B-like protein 
 gma-u.5   100781586   thioredoxin domain-containing protein PLP3A 
 gma-u.5   100305749   uncharacterized LOC100305749 
 sly-u.5   101245225   thioredoxin domain-containing protein PLP3B 
 osa-u.5   4350878   thioredoxin domain-containing protein PLP3A 
 osa-u.5   4338227   thioredoxin domain-containing protein PLP3A 
 zma-u.5   100273012   uncharacterized LOC100273012 
 zma-u.5   100304368   Thioredoxin domain-containing protein PLP3B 
 bra-r.6   103860683   thioredoxin domain-containing protein PLP3A 
 bra-r.6   103841017   thioredoxin domain-containing protein PLP3A 
 vvi-u.5   100264353   thioredoxin domain-containing protein PLP3A 
 vvi-u.5   100242528   thioredoxin domain-containing protein PLP3A 
 ppo-u.5   7495501   thioredoxin domain-containing protein PLP3B 
 mtr-u.5   11405182   thioredoxin domain-containing protein PLP3B 
 tae-r.2   123164144   thioredoxin domain-containing protein PLP3B 
 tae-r.2   123156448   thioredoxin domain-containing protein PLP3B 
 tae-r.2   123154856   thioredoxin domain-containing protein PLP3B 
 hvu-r.1   123413640   thioredoxin domain-containing protein PLP3B-like 
 ghi-r.1   107913056   thioredoxin domain-containing protein PLP3B 
 ghi-r.1   107945828   thioredoxin domain-containing protein PLP3B 
 ghi-r.1   107935421   thioredoxin domain-containing protein PLP3B 
 bna-r.1   106401113   thioredoxin domain-containing protein PLP3A 
 bna-r.1   106451360   thioredoxin domain-containing protein PLP3A 
 bna-r.1   106440125   thioredoxin domain-containing protein PLP3A 
 sbi-r.1   110435356   thioredoxin domain-containing protein PLP3B-like 
 sot-r.1   102594865   thioredoxin domain-containing protein PLP3A 
 cit-r.1   102617425   thioredoxin domain-containing protein PLP3B 
 bdi-r.1   100840860   thioredoxin domain-containing protein PLP3B 
 nta-r.1   107826735   thioredoxin domain-containing protein PLP3B 
 nta-r.1   107819916   thioredoxin domain-containing protein PLP3B 
 nta-r.1   107801229   thioredoxin domain-containing protein PLP3B-like 

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Top 50 coexpressed genes to CHLRE_17g717750v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_17g717750v5 (cre-r.1 coexpression data)

CoexMap"5729288"


creCHLRE_17g717750v5 | Entrez gene ID : 5729288      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 2 2 1 2 2 2 2 1 1 3 1 3 3 1 1 1 1 3
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (2907 genes)  IEA  
GO MF
Protein XP_001703737.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  cysk 1,  nucl 1,  cysk_plas 1  (predict for XP_001703737.1)
Subcellular
localization
TargetP
other 7  (predict for XP_001703737.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_17g717750v5
ath-u.5
for
PLP3a
ath-u.5
for
PLP3b
gma-u.5
for
100781586
gma-u.5
for
100305749
sly-u.5
for
101245225
osa-u.5
for
4350878
osa-u.5
for
4338227
zma-u.5
for
100273012
zma-u.5
for
100304368
bra-r.6
for
103860683
bra-r.6
for
103841017
vvi-u.5
for
100264353
vvi-u.5
for
100242528
ppo-u.5
for
7495501
mtr-u.5
for
11405182
tae-r.2
for
123164144
tae-r.2
for
123156448
tae-r.2
for
123154856
hvu-r.1
for
123413640
ghi-r.1
for
107913056
ghi-r.1
for
107945828
ghi-r.1
for
107935421
bna-r.1
for
106401113
bna-r.1
for
106451360
bna-r.1
for
106440125
sbi-r.1
for
110435356
sot-r.1
for
102594865
cit-r.1
for
102617425
bdi-r.1
for
100840860
nta-r.1
for
107826735
nta-r.1
for
107819916
nta-r.1
for
107801229


Ortholog ID: 6018
Species cre ath ath gma gma sly osa osa zma zma bra bra vvi vvi ppo mtr tae tae tae hvu ghi ghi ghi bna bna bna sbi sot cit bdi nta nta nta
Symbol CHLRE_17g717750v5 PLP3a PLP3b LOC100781586 LOC100305749 LOC101245225 LOC4350878 LOC4338227 LOC100273012 LOC100304368 LOC103860683 LOC103841017 LOC100264353 LOC100242528 LOC7495501 LOC11405182 LOC123164144 LOC123156448 LOC123154856 LOC123413640 LOC107913056 LOC107945828 LOC107935421 LOC106401113 LOC106451360 LOC106444321 LOC110435356 LOC102594865 LOC102617425 LOC100840860 LOC107826735 LOC107819916 LOC107801229
Function* uncharacterized protein thioredoxin domain PLP3A-like protein thioredoxin domain PLP3B-like protein thioredoxin domain-containing protein PLP3A uncharacterized LOC100305749 thioredoxin domain-containing protein PLP3B thioredoxin domain-containing protein PLP3A thioredoxin domain-containing protein PLP3A uncharacterized LOC100273012 Thioredoxin domain-containing protein PLP3B thioredoxin domain-containing protein PLP3A thioredoxin domain-containing protein PLP3A thioredoxin domain-containing protein PLP3A thioredoxin domain-containing protein PLP3A thioredoxin domain-containing protein PLP3B thioredoxin domain-containing protein PLP3B thioredoxin domain-containing protein PLP3B thioredoxin domain-containing protein PLP3B thioredoxin domain-containing protein PLP3B thioredoxin domain-containing protein PLP3B-like thioredoxin domain-containing protein PLP3B thioredoxin domain-containing protein PLP3B thioredoxin domain-containing protein PLP3B thioredoxin domain-containing protein PLP3A thioredoxin domain-containing protein PLP3A thioredoxin domain-containing protein PLP3A thioredoxin domain-containing protein PLP3B-like thioredoxin domain-containing protein PLP3A thioredoxin domain-containing protein PLP3B thioredoxin domain-containing protein PLP3B thioredoxin domain-containing protein PLP3B thioredoxin domain-containing protein PLP3B thioredoxin domain-containing protein PLP3B-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00510 N-Glycan biosynthesis 4
sly00513 Various types of N-glycan biosynthesis 4
sly04141 Protein processing in endoplasmic reticulum 4
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 8
osa00510 N-Glycan biosynthesis 6
osa00513 Various types of N-glycan biosynthesis 5
osa04145 Phagosome 3
osa04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 3
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
zma00510 N-Glycan biosynthesis 2
zma00513 Various types of N-glycan biosynthesis 2
zma04141 Protein processing in endoplasmic reticulum 2
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
bra04145 Phagosome 4
bra04142 Lysosome 2
bra03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo04141 Protein processing in endoplasmic reticulum 2
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
ghi04144 Endocytosis 2
ghi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
ghi04144 Endocytosis 2
ghi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 2
sot04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03060 Protein export 3
bdi04144 Endocytosis 3
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
nta00062 Fatty acid elongation 2
nta01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
nta00062 Fatty acid elongation 2
nta01040 Biosynthesis of unsaturated fatty acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5729288 824260 836773 100781586 100305749 101245225 4350878 4338227 100273012 100304368 103860683 103841017 100264353 100242528 7495501 11405182 123164144 123156448 123154856 123413640 107913056 107945828 107935421 106401113 106451360 106444321 110435356 102594865 102617425 100840860 107826735 107819916 107801229
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